Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01783 atGGCTTATCTTCCATGCTTTCTGCTTCTtttaactctctctctcttcacaCCCAACTTTGTTTCCTCATCACCAGTTCAAGACCCTGAGCTCGTTGTACAAGACGTGCACAGGAGCATCAATGCCTCTAGAAGAAACCTGGGTTATTTATCATGTGGGACTGGTAACCCCATTGATGATTGCTGGAGGTGTGACCCCAACTGGGAGAGCAACCGGCAAAGGCTTGCCGATTGCGCCATTGGGTTCGGTAAGGATGCCATGGGAGGAAAAAATGGTCGAATCTATGTTGTGACTGACTCCGGCGACGACGATGCGGTGAACCCCAAGCCGGGAACTTTAAGATATGGTGTTATTCAAGATGAGCCATTGTGGATCATCTTCAAGAGAGACATGGTCATCACTCTTAAGCAAGAGCTTGTGATGAACTCCTACAAGACCATTGATGGAAGGGGTGCCAGCGTTCACATTGCCGGCGGTGGGTGCATTACCATACATTATGCATCTAACATCATCATCCATGGCATCCACGTCCATGACTGTAAACCGACGGGGAATGCCGATATCAGAGACTCTCCTCACCATTATGGGTGGTGGACAAAATCGGACGGTGATGGCATCTCCATCTTTAATTCAAGGCATGTGTGGGTTGACCATTGTTCATTGTCTAATTGCCAAGATGGACTCATTGATGCCATCCATGGATCCACAGCAATCACCATCTCCAGCAACTATATGACCCATCATGACAAGGTCATGCTCTTGGGCCATAGTGACTCTTATACACAAGACAAGGATATGCAGGTCACCATCGCCTTTAATCATTTTGGAGAAGGGCTTGTACAAAGAATGCCAAGGTGTAGGCACGGTTACTTCCACGTGGTGAACAATGACTACACTCACTGGGAAATGTATGCCATTGGTGGAAGTGCTCAGCCCACCATCAACAGTCAAGGAAACAGGTTTCTTGCACCGGACAACCGGTTCAGCAAGGAAGTAACAAAGCACGAGGACGCCCCAGAGAATGAATGGATGCACTGGAACTGGCGGTCAGAAGGTGACCTCTTATTGAACGGAGCTTTCTTCAGGCAATCTGGTGCCGGAGCCTCTTCCAGCTACGCCAGGGCATCGAGCCTCAGCGCAAGGCCATCGAACCTCGTGAGTTCAATGACTCTCACTGCAGGTGCACTCAACTGCAGAAAGGGCAACCGCTGCTG 1214 0.4868 MYAIGGSAQPTINSQGNRFLAPDNRFSKEVTKHEDAPENEWMHWNWRSEGDLLLNGAFFRQSGAGASSSYARASSLSARPSNLVSSMTLTAGALNCRKGNRC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01783 102 Gene3D - 1 95 IPR012334 -
Bva04g01783 102 SUPERFAMILY Pectin lyase-like 1 96 IPR011050 -
Bva04g01783 102 PANTHER PECTATE LYASE 1 99 - -
Bva04g01783 102 PRINTS Pollen allergen Amb family signature 44 68 IPR018082 -
Bva04g01783 102 PRINTS Pollen allergen Amb family signature 73 96 IPR018082 -
Bva04g01783 102 PRINTS Pollen allergen Amb family signature 2 21 IPR018082 -
Bva04g01783 102 PANTHER PECTATE LYASE 18-RELATED 1 99 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01783 Bva-Chr4 18767856 18769692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01783 1 102 Polysaccharide Lyase AT4G13710 71.569 4.87e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01783 K01728 - zju:107415231 176.407