Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01767 ATGGCCTCCATAATCGGAGCACCATCGTCATCTTCTTCAAACCTCCTTCTCAAACCTTCGCTATCTTCTTCACCGTCACAATTTACTTCTACGCATCTCTTGCCCTGTAATCCTCGCTTTAAACCAAAAACCCTACCTTCTAAACTTTCAGCCGCCTTGTCCTCCTCTTTCATCGCCAATGATTCTCCCATCTTCCGCTACTCCGTTTTCTCTTCTTCGGTGCCCGGCGATTCGTCTTCTCGCCGGCGGTCATTTACTGTTCGAGCAGCTAGAGGGAAATTTGAGAGGAAGAAACCTCATGTTAATATTGGCACAATCGGTCACGTTGATCATGGGAAGACGACTCTTACGGCTGCTCTTACAATGGCCTTGGCTTCTGTGGGCAATAGTGCGCCAAAGAAGTACGATGAAATCGATGCAGCGCCAGAGGAAAGAGCCCGAGGGATCACGATTAATACTGCGACGGTTGAATATGAGACTGAGAGCAGGCACTATGCTCATGTAGATTGTCCAGGGCATGCTGATTACGTGAAGAATATGATCACGGGTGCGGCGCAAATGGACGGTGCCATTTTGGTAGTTTCAGGTGCAGATGGACCAATGCCTCAAACGAAAGAGCACATTTTGTTGGCGAAACAAGTGGGTGTACCCAATATGGTGGTTTTCTTAAACAAGCAGGATCAGGTTGATGACGAAGAGCTCCTTCAGCTGGTGGAGTTGGAAGTACGAGAGCTTTTGACTTTGTATGAATTTCCAGGTGATGATGTGCCTATAGTTTCAGGTTCTGCACTGTTGGCCTTACAGGCATTGATGGCCAACCCAAAAATCAAGAGAGGAGAGAATCAGTGGGTTGATAAAATTTACGAATTGACGGATGCTGTGGATGGTTATATACCAATTCCACAGCGACAAACCGATTTACCATTCCTTATGGCGGTTGAAGATGTGTTTTCAATCACTGGTCGTGGTACTGTGGCAACGGGAAGGGTTGAGAGGGGCAAAGTTAAGGTTGGGGACTCTGTAGATATAGTGGGTCTAAGGGAAACCAGAAATACAACGGTTACTGGGGTTGAAATGTTTCAGAAGACACTTGATGAGGCACTTGCTGGTGATAATGTAGGGCTTTTGCTTAGGGGTATTCAGAAAACAGATATTCAAAGAGGAATGGTTATTGCCAAACCTGGCACCATTACACCACATACCAAGTTTGCTGCTGTTGTGTATGTGTTGAAAAAGGAAGAGGGTGGAAGGCATTCACCATTCTTTGCTGGATATAGGCCTCAATTCTACATGAGGACCACTGATGTTACTGGGAAAGTTGCCAAAATTATGAATGATCAGGATGAAGAATCTAAGATGGTAATGCCTGGAGATCGTGTGACGATGGTCGttgaattaattttcccaGTAGCTTGTGAGCAGGGCATGAGATTTGCAATTAGAGAAGGTGGTAAGACAGTGGGAGCTGGTGTAATCCAGTCCATCATTGAATG 1493 0.4548 MASIIGAPSSSSSNLLLKPSLSSSPSQFTSTHLLPCNPRFKPKTLPSKLSAALSSSFIANDSPIFRYSVFSSSVPGDSSSRRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASVGNSAPKKYDEIDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLTLYEFPGDDVPIVSGSALLALQALMANPKIKRGENQWVDKIYELTDAVDGYIPIPQRQTDLPFLMAVEDVFSITGRGTVATGRVERGKVKVGDSVDIVGLRETRNTTVTGVEMFQKTLDEALAGDNVGLLLRGIQKTDIQRGMVIAKPGTITPHTKFAAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVAKIMNDQDEESKMVMPGDRVTMVVELIFPVACEQGMRFAIREGGKTVGAGVIQSIIE 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01767 497 Pfam Elongation factor Tu C-terminal domain 396 495 IPR004160 -
Bva04g01767 497 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 98 302 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 PANTHER ELONGATION FACTOR TU 50 497 - -
Bva04g01767 497 CDD EFTU_III 398 492 - -
Bva04g01767 497 Pfam Elongation factor Tu domain 2 323 391 IPR004161 GO:0005525
Bva04g01767 497 TIGRFAM small_GTP: small GTP-binding protein domain 101 233 IPR005225 GO:0005525
Bva04g01767 497 PANTHER ELONGATION FACTOR TU-RELATED 50 497 - -
Bva04g01767 497 Hamap Elongation factor Tu [tuf]. 89 497 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bva04g01767 497 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 396 496 IPR009001 -
Bva04g01767 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 324 IPR027417 -
Bva04g01767 497 CDD EF_Tu 99 301 IPR041709 -
Bva04g01767 497 Gene3D Translation factors 436 496 - -
Bva04g01767 497 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 139 154 IPR031157 -
Bva04g01767 497 Gene3D Translation factors 304 432 - -
Bva04g01767 497 TIGRFAM EF-Tu: translation elongation factor Tu 90 497 IPR004541 GO:0003746|GO:0005525|GO:0006414
Bva04g01767 497 PRINTS GTP-binding elongation factor signature 182 193 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 PRINTS GTP-binding elongation factor signature 146 154 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 PRINTS GTP-binding elongation factor signature 102 115 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 PRINTS GTP-binding elongation factor signature 166 176 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 Gene3D - 90 301 IPR027417 -
Bva04g01767 497 Pfam Elongation factor Tu GTP binding domain 98 299 IPR000795 GO:0003924|GO:0005525
Bva04g01767 497 SUPERFAMILY Translation proteins 303 399 IPR009000 -
Bva04g01767 497 CDD EFTU_II 309 395 IPR033720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01767 Bva-Chr4 18705153 18706880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01767 96 495 Eukaryotic Initiation Factors Gene Family AT5G60390 29.638 2.45e-45 163