Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01760 ATGGCTAGGAGCTGGATTATTGACATAGGAGGATTTGCCAAGAAAGTTAAAAACACTACTTTGTCTTCAGATGATCAAATCAAAGACTGTGGAGCTTATCGAGAATGCCCGAAATGTCATCATCATATTGATAACAGTAATGTTTCTCCTGAGTGGCCTGGCTTTCCCGTTGGTGTGAAGTTTGATCCTACTGACGCAGAGCTATTAGATCATTTAGCTGCTAAATGTGGCATTGGGAACCAAGAGCCACATCTCTTTATCAATGAGTTCATCCCAACATTAGAGGGAGATCAAGGTATCTGCTACACGCATCCTGAAAATCTTCCAGGTGCTAATAAAAATGGGGGCAGCGTCCACTTTTTTCACCGAACAATGAATGCATATGCTACTGGTCAACGAAAGCGTCGAAAGATTCATGATCAACATGGTTTGACTGAGGAGCGTGTGAGGTGGCACAAGACTGGAAAGACCAAGCCTGTGATCGAAGATGGAGTTTGTAAAGGCTTCAAGAAGTTCATGGTTCTATATGTAAGATCTAAGAATGAGAAGGGTTCCAAGCCATATAAATCCAATTGGGTGATGCACCAATATCATCTAGGGactgaagaagatgaaaaggatGTTGAATACGTGGtttcaaaaatcttttatcaaCAGAAGCAGACTGAGAAAAATGAGGAGAATCCTGTGGTTGAAGATTCTGATAATATGACCTCACGAACAAGTCCAAGAacaccaaatccaaatcctcCCAATGCACCTCGTCCAAAGTCTTTTGACTATGATGATAATTTTGAAGAAGATTTGCTCCCAGTACTGACCCAGGATGCGAAGTCTATCCCTGGAAAATCACAAGGTCCATCTGATATTCAAGGCGAGGAAAATGTTGGCAACCTTACTTGCTTGGCTGGTGAATCACAGGCTGTTGAAAACTCTGACTTTGATGGCTTGGACGATATCTTACTGTGCAAGGAGAACTTTGATCCTTCTGCTCTCTTAAATGATTCTGAATTGGATAGCACTACTTTCAATGGCTTTGCTAGCAACACAAACGAGTTGGCTGGGAACGATAATGCATCCCATGAAATATCTGACCTTGCTGACCTGCATTTTGATTCTCAACCAGATTTCCTACTTTATAATTTGCAATATTCGTCTCAAGACAGCATCCTTGATTGGGTAAACAAGTTATG 1193 0.3982 MARSWIIDIGGFAKKVKNTTLSSDDQIKDCGAYRECPKCHHHIDNSNVSPEWPGFPVGVKFDPTDAELLDHLAAKCGIGNQEPHLFINEFIPTLEGDQGICYTHPENLPGANKNGGSVHFFHRTMNAYATGQRKRRKIHDQHGLTEERVRWHKTGKTKPVIEDGVCKGFKKFMVLYVRSKNEKGSKPYKSNWVMHQYHLGTEEDEKDVEYVVSKIFYQQKQTEKNEENPVVEDSDNMTSRTSPRTPNPNPPNAPRPKSFDYDDNFEEDLLPVLTQDAKSIPGKSQGPSDIQGEENVGNLTCLAGESQAVENSDFDGLDDILLCKENFDPSALLNDSELDSTTFNGFASNTNELAGNDNASHEISDLADLHFDSQPDFLLYNLQYSSQDSILDWVNKL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01760 397 Gene3D NAC domain 64 224 IPR036093 GO:0003677|GO:0006355
Bva04g01760 397 SUPERFAMILY NAC domain 39 218 IPR036093 GO:0003677|GO:0006355
Bva04g01760 397 Pfam No apical meristem (NAM) protein 56 199 IPR003441 GO:0003677|GO:0006355
Bva04g01760 397 MobiDBLite consensus disorder prediction 219 263 - -
Bva04g01760 397 ProSiteProfiles NAC domain profile. 55 218 IPR003441 GO:0003677|GO:0006355
Bva04g01760 397 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 395 - -
Bva04g01760 397 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 395 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01760 Bva-Chr4 18532088 18535856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01760 36 218 NAC Transcription Factor Family AT1G28470 55.556 2.28e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva04g01760 NAM 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01760 - - gmx:100794879 545.428