Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01723 ATGGATAAGAAACTGGGCAGTTCATCTCAAGATCCTGAAGTGAGAAAGGGGCCATGGACCATGGAGGAGGACTTGATCTTGATCAACTATATTGCTAATCACGGAGAAGGTGTCTGGAACTCCTTAGCCAAAGCTGCTGGTCTTAAACGTACCGGAAAGAGTTGCCGGCTGCGGTGGCTCAACTATCTCCGCCCTGATGTTAGGAGAGGGAATATTACACCGGAAGAACAGCTCTTGATCATGGAACTTCATGCAAAGTGGGGAAACAGGTGGTCAAAAATTGCAAAGCATCTTCCGGGAAGGACTGATAACGAAATTAAGAACTACTGGAGGACTAGAATTCAAAAGCACATTAAGGAAGCCGAGAGCTTTCAGCAGCAGAGTACTTCATCGGAGACAAATGATCAAGCAGCAAGCACTAGCCAAATGTGCACCATGGCTCACCATCACGAGCCCATTGAGAGCTTCTCGCCACCCTTATACCAGGGAACTCTGGAGCCATTTCCAACACACCAGCTCCCCACCTTTCCTAATTGCACCAATGACAACGGCACCAACACCAGCAGCTACTGGAACATGGAGGATATCTGGTCCATGCAATTACTTAACGGGGATTA 617 0.4797 MDKKLGSSSQDPEVRKGPWTMEEDLILINYIANHGEGVWNSLAKAAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWRTRIQKHIKEAESFQQQSTSSETNDQAASTSQMCTMAHHHEPIESFSPPLYQGTLEPFPTHQLPTFPNCTNDNGTNTSSYWNMEDIWSMQLLNGD 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01723 205 Gene3D - 73 144 - -
Bva04g01723 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bva04g01723 205 PANTHER TRANSCRIPTION FACTOR MYB21-RELATED 5 202 - -
Bva04g01723 205 CDD SANT 73 112 IPR001005 -
Bva04g01723 205 Gene3D - 16 68 - -
Bva04g01723 205 SMART sant 68 116 IPR001005 -
Bva04g01723 205 SMART sant 15 65 IPR001005 -
Bva04g01723 205 MobiDBLite consensus disorder prediction 121 141 - -
Bva04g01723 205 CDD SANT 18 63 IPR001005 -
Bva04g01723 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bva04g01723 205 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Bva04g01723 205 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bva04g01723 205 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bva04g01723 205 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bva04g01723 205 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bva04g01723 205 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 202 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01723 Bva-Chr4 18335689 18339695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01723 10 205 MYB Transcription Factor Family AT3G01530 58.883 1.14e-76 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g01723 Myb_DNA-binding 6.8e-15 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01723 04 18335689 18339695 Bva04g01723 04 18335689 18339695 ECH