Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01715 atggagcATGTATCGGAAAAAAGATTTCCTCTCAACGCGaaagattataaattatatgaagaAGTTGGTGAAGGCGTTAGTGCCACTGTGTACAGAGCTCTCTGCATTCCACTCAATGTGACAGTTGCCATCAAGGTTCTTGATCTAGAAAAGTGCAATAATGATCTGGATGGCATTCGGAGAGAGGTGCAGACAATGAGCTTGATTGACCATCCAAATGTTTTACAGGCACATTGCTCTTTCACTACTGGACACAACCTTTGGGTTGTGATGCCATACATGTCTGAGGGATCTTGCCTTCATATAATGAAATCTTCTTATCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTATTGCACGAGGTTCTCAAAGCACTTGTCTATCTTCACGGCCATGGGCACATACATAGAGATGTAAAGGCTgggaatattttgattgattccAGTGGTGCAGTCAAATTAGCTGATTTTGGGGTATCAGCTTGTATGTTTGATGCTGGAGACAGGCAACGTTCAAGAAATACTTTTGTTGGGACTCCTTGCTGGATGGCTCCCGAAGTTATGCAGCAAGTACATGGATATGACTTTAAGGCAGACATTTGGTCATTTGGTATAACAGCACTTGAACTTGCCCATGGTCATGCCCCATTTTCGAAGTATCCACCCATGAAAGTTTTGCTCATGACTTTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGATTTACAAAGTCTTTCAAAGATTTGGTAGGCACCTGCTTGGTAAAGGACCCAAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCACCAGTTCTTTAAACATGCCCGCTCTGCAGAATATCTACGTGGCACCATTCTGGATGGCCTTCCTCCACTAGGAGAACGTTTTAGGATGCTGAAGGCAAAAGAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGAACAAATATCTCAAAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTCAACCTTGAGGATTTAAAAAGCCAAGCTGCTCTTATTCAAGATGATGGCATGCCAAATGTGGAAGAGCCAGATATGGGTAAGAAGCAAAAGGAGAGGACTGAGGATGTTGGGGTTGCAGCAGAGGGGCTATCTTCTTTAGAAGCTAATCATTCAAATGCTGCATTCACACCAGACAAAGAGGATGGCTTCAACAATCTTCAGGATTTGGAGAGTTCGCTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTTAAAGGTTGTTTCGATGTTTGTGAGGATGATGTCAATAATACCAGTCCAAGAGACTTGGATCAGGACTTTGGAAGGGATGAGAACGGAAGTTCTGGGCCAAGTAGTTCTTTGCCACAAATTGTTATAACTGAGCATAAAAAGTTTTGGAGTGGTTCCTTGCTTCCTGATAATTTCCCTTCTTCCAAAAAAGTTGTTACTGATGGAGACAGGGACTATctgcaaacaaaatattactcTGAGCGAAATCATAGTGGTCCTTTGCTACATCGGCAGAAGAGAGACACCAACAACCTTTCATCTGTTGATGATCCATCAGAAGGAGCAGTTGTCCAACGTAAGGGGAGGTTTAAGGTCACATCTGCAGATCTCAGTCCCAAGGGTCCTCGGAATTGTAATTTTGGCCCAGTTTGTGGAGATTCAGCCAGTCcaccaaaacaaaactttacATCTGCTTCTATTCTTCCATCACTACAGTGCATTTTGCAACAGAACAGTTTGCAAAGGGAAGAAATtgtcaaattaataaagtatgTGGAGCAATCTTGTGGTAAGAATACAGAATCAGCAGAGGCAGGGACAGCGGATCTTTTGCAGGTACCACCTGCAACAACTAGGGAGAGAGAGCTGCAGTCGCAGGTGATTCAACTCCAACAGAGCATTGCAAGCCTTGTTGAGGAATTGCAAAGACAGAAGATGAAAAATGCCCAGTTAGAGAAACAACTGAACTCTATTGCTAACAGAGGAGAAAAGTG 2021 0.4077 MEHVSEKRFPLNAKDYKLYEEVGEGVSATVYRALCIPLNVTVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLQAHCSFTTGHNLWVVMPYMSEGSCLHIMKSSYPEGFEEPVIATLLHEVLKALVYLHGHGHIHRDVKAGNILIDSSGAVKLADFGVSACMFDAGDRQRSRNTFVGTPCWMAPEVMQQVHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFTKSFKDLVGTCLVKDPKKRPSSEKLLKHQFFKHARSAEYLRGTILDGLPPLGERFRMLKAKEADLLVQNKALYEDKEQISQKEYIRGISAWNFNLEDLKSQAALIQDDGMPNVEEPDMGKKQKERTEDVGVAAEGLSSLEANHSNAAFTPDKEDGFNNLQDLESSLASFPIKPLQALKGCFDVCEDDVNNTSPRDLDQDFGRDENGSSGPSSSLPQIVITEHKKFWSGSLLPDNFPSSKKVVTDGDRDYLQTKYYSERNHSGPLLHRQKRDTNNLSSVDDPSEGAVVQRKGRFKVTSADLSPKGPRNCNFGPVCGDSASPPKQNFTSASILPSLQCILQQNSLQREEIVKLIKYVEQSCGKNTESAEAGTADLLQVPPATTRERELQSQVIQLQQSIASLVEELQRQKMKNAQLEKQLNSIANRGEK 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01715 673 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01715 673 SUPERFAMILY Protein kinase-like (PK-like) 13 306 IPR011009 -
Bva04g01715 673 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01715 673 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 670 - -
Bva04g01715 673 MobiDBLite consensus disorder prediction 500 522 - -
Bva04g01715 673 Gene3D Transferase(Phosphotransferase) domain 1 97 292 - -
Bva04g01715 673 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01715 673 Coils Coil 629 670 - -
Bva04g01715 673 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Bva04g01715 673 MobiDBLite consensus disorder prediction 500 535 - -
Bva04g01715 673 CDD STKc_OSR1_SPAK 14 277 - -
Bva04g01715 673 MobiDBLite consensus disorder prediction 438 461 - -
Bva04g01715 673 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 670 - -
Bva04g01715 673 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01715 Bva-Chr4 18282243 18298658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01715 1 672 MAP Kinase Kinase Kinase Kinase AT5G14720 68.215 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Bva04g01715 Pkinase 8.8e-58 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01715 04 18282243 18298658 Bva04g01715 04 18282243 18298658 ECH