Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01710 ATGGCCGGAAAAGGTGAGGGTCCGGCGATCGGAATCGATCTCGGCACAACCTACTCATGCGTCGGAGTATGGCAGCACGATCGTGTAGAGATCATTGCCAATGACCAGGGGAACAGAACGACACCGTCTTATGTGGGCTTTACTGACTCCGAAAGGTTGATCGGCGATGCCGCTAAGAACCAGGTCGCCATGAACCCAATCAACACCGTGTTTGATGCAAAGCGGTTGATTGGGAGAAGAATCTCGGACCCTTCTGTTCAGAGTGATATGAAGCTGTGGCCATTCAAGGTCATTGGTGGTCCTGGTGAAAAGCCCATGATTGGTGTTACTTACAAGGGTGAGGAGAAGCAATTTGCTGCTGAGGAAATCTCATCCATGGTCTTGACAAAGATGAGAGAGATCGCAGAGGCATACCTTGGATCAACTGTGAAGAATGCAGTTGTCACTGTGCCGGCTTACTTCAATGACTCCCAACGTCAAGCTACCAAAGATTCCGGTGTTATTGCAGGCCTCAATGTCATGAGGATAATTAATGAGCCCACTGCTGCAGCTATTGCCTATGGTCTTGACAAGAAAGCTTCTAGTGCTGGGGAGAAAAATGTTCTGATCTTTGATCTCGGTGGTGGTACTTTTGATGTCTCTCTTCTCACCATTGAGGAGGGTATCTTTGAAGTTAAAGCCACTGCTGGAGACACTCACCTTGGAGGAGAGGACTTTGATAATAGAATGGTAAACCACTTTGTACAGGAGTTCAAGAGGAAGAACAAAAAGGACATAACTGGAAACCCAAGGGCTCTCAGAAGGTTGCGAACTGCATGTGAGAGGGCAAAGAGGACACTCTCATCCACTGCTCAGACAACCATTGAGATAGATTCTTTGTATGAGGGTATTGACTTCTATTCAACCATTACTCGCGCTAGGTTTGAAGAACTCAACATGGACCTTTTCAGGAAGTGTATGGAGCCTGTTGAGAAATGTCTTAGGGATGCTAAGATGGACAAGAGCACTGTCCATGATGTTGTCCTTGTTGGTGGATCTACAAGGATTCCCAAAGTGCAGCAGCTATTGCAGGATTTCTTCAACGGGAAGGATCTCTGCAAGAGCATCAACCCCGACGAAGCTGTTGCTTACGGTGCTGCTGTTCAAGCTGCTATCTTGAGTGGTGAGGGTAATGAAAAGGTTCAGGATCTTTTACTTCTAGATGTTACTCCTTTATCTCTTGGTTTGGAGACTGCCGGAGGTGTGATGACGGTCCTCATTCCAAGGAACACTACCATCCCTACCAAGAAGGAGCAAGTTTTCTCAACCTACTCTGACAATCAACCCGGTGTGTTGATTCAAGTTTACGAAGGTGAGAGAACAAGAACAAGGGATAACAACTTGCTGGGTAAGTTTGAGCTTTCAGGCATTCCTCCAGCTCCCAGGGGTGTCCCTCAGATCAATGTCTGCTTTGATATCGACGCAAATGGTATCTTGAATGTCTCTGCTGAGGACAAAACCACTGGGCAGAAGAATAAGATCACTATCACTAATGACAAAGGCAGactatcaaaagaagaaattgagaaaatggtTCAAGAAGCTGAGAAGTACAAGGCTGAAGATGAGGAGCACAAGAAGAAAGTTGAAGCCAAGAACTCCTTGGAGAACTACGCCTACAACATGAGGAACACCGTGAAGGACGAGAAGATCAGCTCAAAGCTTTCCcaagaagacaagaaaaagatcGAGGACGCGATCGAGCAGGCCATTCAATGGCTTGACAGCAACCAGCTTGCTGAAGCAGATGAATTCGAGGACAAGATGAAGGAGCTCGAAGGCATTTGCAACCCCATTATAGCTAAAATGTATCAAGGTGGGCCAGATGCAGGAGCTGGCATGGCCGCAAATGCCCCTCCTGCTGGTGGTAGTGGTGCTGGCCCCAAAATTGAGGAGGTTGATTA 1943 0.4622 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRISDPSVQSDMKLWPFKVIGGPGEKPMIGVTYKGEEKQFAAEEISSMVLTKMREIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDSGVIAGLNVMRIINEPTAAAIAYGLDKKASSAGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNSLENYAYNMRNTVKDEKISSKLSQEDKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELEGICNPIIAKMYQGGPDAGAGMAANAPPAGGSGAGPKIEEVD 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01710 647 PANTHER HEAT SHOCK PROTEIN 70KDA 1 628 IPR013126 GO:0005524|GO:0140662
Bva04g01710 647 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Bva04g01710 647 Gene3D - 192 366 - -
Bva04g01710 647 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Bva04g01710 647 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 36 48 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 477 493 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 396 415 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 209 219 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 369 389 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 8 21 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 58 66 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 146 166 - -
Bva04g01710 647 PRINTS 70kDa heat shock protein signature 337 353 - -
Bva04g01710 647 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 628 - -
Bva04g01710 647 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Bva04g01710 647 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Bva04g01710 647 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Bva04g01710 647 Gene3D - 545 619 IPR029048 -
Bva04g01710 647 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Bva04g01710 647 MobiDBLite consensus disorder prediction 621 647 - -
Bva04g01710 647 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Bva04g01710 647 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Bva04g01710 647 Coils Coil 518 545 - -
Bva04g01710 647 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 623 IPR029048 -
Bva04g01710 647 Gene3D - 71 126 - -
Bva04g01710 647 Gene3D - 10 384 - -
Bva04g01710 647 Gene3D Actin; Chain A, domain 4 235 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01710 Bva-Chr4 18238547 18241289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01710 1 647 Calmodulin-binding Proteins AT3G12580 91.846 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01710 K03283 - gmx:100789485 1196.8