Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01693 ATGCAGAACGAGGAGGGACAAATTACCGAGCTCTACATTCCAAGGAAATGTTCTGCAACTAACCGGTTGATCACATCCAAGGACCATGCTTCTGTCCAGATTAACGTTGGGCATTTGGATGAGAATGGTATCTACAATGGCCATTTCTCCACATTTGCCCTTTGCGGCTTTATTCGTGCTCAGGGAGATGCTGACAGTGCATTAGATCGACTCtggcaaaagaagaaagttgagGCTAAACAGCAGTA 248 0.4234 MQNEEGQITELYIPRKCSATNRLITSKDHASVQINVGHLDENGIYNGHFSTFALCGFIRAQGDADSALDRLWQKKKVEAKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01693 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva04g01693 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva04g01693 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Bva04g01693 82 Gene3D - 1 82 IPR038579 -
Bva04g01693 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Bva04g01693 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01693 Bva-Chr4 18172805 18173818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01693 1 81 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 86.420 3.27e-53 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01693 K02971 - jre:108994828 166.007