Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01684 ATGTCAGAGGATGTTCTTTCCATTACAATTGCTAAAATGAGGAATGCTCTTCTCCCTTCAGTGCCTTCACGGCTTCACTGCTAtgGAAACAATGAAGCTAAGatggaaaatttgaaagttcCCATGCAAATGAACGACCTTATTCATTTTCATAGCAATGGCATCTCTATGGGatctaaaattttcaacaatgGCAGCCAATTGGGAAATGGAGGGAACATCATGTCTATCCAGTCTCATTCTCTTATTGATGATTACAATCGTCATTATCCAGTTAGTCTTCAAAGTAATTACTCCAACATTAAAGACATTTCTCAGCAATCTTTGATGCTTAGCAAGAAACAATCAATTTCTCAACATGAAGAAGGTAGAGGAAACAAGAGAAAACGTCCATATGAGTTCACTGACAATAGCATGTCACCATTGAGAGAGATGATACATCATCAGAAAATCCAAGTGCCAATCTCAGAACCAAAATGGCATCAAGCAATAGAGGATTCACGGGATATCCATGCGCACAAAcTGCAAATGCCTGTGAGAGGAAGGCAAAAGCTTAGTGAGAAAATCACAAGTTTACAAAAGCTGGTGTCGCCTTATGGGAAAACTGACACTGCCTCAGTTCTTCATGAGGCTTCTCTCTATATCAAGCTTCTTCAAGAGCAAATTCAGAACTTGTATCAGATGCTGAGTTTCTCATATAATACTGTCAAAACCATTCATGCACAGGGATGTGGAGAGAAACAGGTTGATCTAAGAAGCAAAGGACTTTGTTTGGTTCCCATTTCAATCACACAGAAAGTAGCAATGGAAGACCAGCTGGTGCATCATGATTCTGCTTCAAGGAGAATTAATGTCCTACCAAGAAATTTTTG 872 0.3784 MSEDVLSITIAKMRNALLPSVPSRLHCYGNNEAKMENLKVPMQMNDLIHFHSNGISMGSKIFNNGSQLGNGGNIMSIQSHSLIDDYNRHYPVSLQSNYSNIKDISQQSLMLSKKQSISQHEEGRGNKRKRPYEFTDNSMSPLREMIHHQKIQVPISEPKWHQAIEDSRDIHAHKLQMPVRGRQKLSEKITSLQKLVSPYGKTDTASVLHEASLYIKLLQEQIQNLYQMLSFSYNTVKTIHAQGCGEKQVDLRSKGLCLVPISITQKVAMEDQLVHHDSASRRINVLPRNF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01684 290 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 229 IPR036638 GO:0046983
Bva04g01684 290 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 36 271 - -
Bva04g01684 290 CDD bHLH_AtbHLH_like 182 225 IPR045239 -
Bva04g01684 290 Gene3D - 173 238 IPR036638 GO:0046983
Bva04g01684 290 PANTHER TRANSCRIPTION FACTOR BHLH112 36 271 - -
Bva04g01684 290 MobiDBLite consensus disorder prediction 110 133 - -
Bva04g01684 290 MobiDBLite consensus disorder prediction 117 133 - -
Bva04g01684 290 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01684 Bva-Chr4 18071803 18075712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01684 162 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21340 43.443 5.31e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01684 - - ccaj:109812405 268.855