Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01678 ATGTCTTTTCAGCATAAAAGCTTTTGGATGCCTCGGGAAGCTGGATGCTTAACTGAAGAAAATATGGGATATGATAACTCCTCCAGAATTGAACCAAAGCGTGGTCATCAGTGGTTTATGGATCCGGGTGAGCCAGAAATGCTCACCAACAATAAGCGGCAAGCAATAGAAACTGTTAGTGGCAGGCAAGTTTCAGGAGTTTCACATCTGAATATTTCTCCATGGGACACCGATTCAGGATTTCATTCAGTTGCAGGTCAGTTTTCTAATCGTCTATTTGGATCTGAACCTGTACGGACTGTTAATTTGGTTGATAAGAATATGTCATCACTTGGAAGTGGAAATCTGCACATGGGAAggaaggattttgagaatcaATATGGAAACAATCCATCAGCAAGTTTGTCAATATCTCATACAAATGAGGACCCTTCATCATCCCTCAATTTTGGTGGCCTTAGAAAAGTTAAAGTAAATCAAGTTAGAGATTCTAGCAATTGCATGTCTGCATCTATGGGGCACTCCTATAGTAGGGCAGATAACAGTACAATTTCAATGGGTTCTGCCTATAATAAGAATGAGGGAAACATATCATTGGCCCCAGCTTATAataatggaaatgaaaatttcatctcTATGGCAACCACAATAAGTAAGACTAATGACAATCTTGTTTCCATAGGTCACGCCTTTAATAAGGGAGATGGGAGTTTTATGTTGATGGGCCACAGTTATGGCAAGGGCGAcgataatatattatcaatgaGTCAGCCCTTTGACAGGGGGGATGGAAATTTCATATCAATGGGTCAGTCATATGAAAAGGACGATAGCAATCTGACATCGTTGGGCACGTCTTATAACAAGGGACACGAAAGCTTTACATCAGTTGGCCTAACCTATAGTAAATCAGGAGAAAATTTCATGACAATTGCTCCTTCCTTTGACAAGGGAACTGATCATATCGTATCAATGGGTTCAACATATGACAAGTTGGACTCCAACATTGTATCAACAGATCCTTTATATGACAAGGGCAATTCTAGCTCTTTACCATTGGGTCACACCTACAATAAGGGTGAGAGCAATACCATATCTTTTGGAGGCTTTCATGATGAACCTGAGCCAAATCCCTCTTGTGGGATTGTTAGTGGCTATGATTTGTTGATGGGTAACCAGAACTCAGTTCAAGGTTTAGATGGCTCAAAGGATCTGATTGAGTCAAATTCTGAACCAATTGTAGATAGCACTGCAAAAGCTAACTCTAAAACTGATACCATTCATAAGAATAAAGAACCAAAGACAGCTAAGAAGGTTCCTCCAAACAACTTCCCTTCAAATGTCAAAAGTTTATTATCAACTGGAATTTTTGATGGTGTTGCTGTGAAATATGTTTCTTGGTCACGGGAGAGAAATCTTAAAGGAGTTATAAAAGGGACTGGATATTTGTGTTCTTGTGATGAGTGTAAGGAATCAAAGGCTCTCAATGCATATGAATTTGAGCGTCATGCTGGTGCCAAGACTAAACACCCTAACAATCACATATACTTCGATAATGGAAAGACCATCTATGCTGTTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGTTCTGCCATTAACCAAAAGAATTTTCGTATCTGGAAAGCATCATATCAAGCTGCTACCCGGGAACTTCAGCGTATTTATGGAAAAGATGAAGTGGTCATACCATCTTA 1748 0.385 MSFQHKSFWMPREAGCLTEENMGYDNSSRIEPKRGHQWFMDPGEPEMLTNNKRQAIETVSGRQVSGVSHLNISPWDTDSGFHSVAGQFSNRLFGSEPVRTVNLVDKNMSSLGSGNLHMGRKDFENQYGNNPSASLSISHTNEDPSSSLNFGGLRKVKVNQVRDSSNCMSASMGHSYSRADNSTISMGSAYNKNEGNISLAPAYNNGNENFISMATTISKTNDNLVSIGHAFNKGDGSFMLMGHSYGKGDDNILSMSQPFDRGDGNFISMGQSYEKDDSNLTSLGTSYNKGHESFTSVGLTYSKSGENFMTIAPSFDKGTDHIVSMGSTYDKLDSNIVSTDPLYDKGNSSSLPLGHTYNKGESNTISFGGFHDEPEPNPSCGIVSGYDLLMGNQNSVQGLDGSKDLIESNSEPIVDSTAKANSKTDTIHKNKEPKTAKKVPPNNFPSNVKSLLSTGIFDGVAVKYVSWSRERNLKGVIKGTGYLCSCDECKESKALNAYEFERHAGAKTKHPNNHIYFDNGKTIYAVVQELKNTPQEMLFDAIQNVTGSAINQKNFRIWKASYQAATRELQRIYGKDEVVIPS 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01678 582 PANTHER N-LYSINE METHYLTRANSFERASE 1 582 - -
Bva04g01678 582 MobiDBLite consensus disorder prediction 125 148 - -
Bva04g01678 582 PANTHER AUTOIMMUNE REGULATOR 1 582 - -
Bva04g01678 582 MobiDBLite consensus disorder prediction 411 443 - -
Bva04g01678 582 Pfam Tify domain binding domain 475 530 IPR032308 -
Bva04g01678 582 MobiDBLite consensus disorder prediction 119 150 - -
Bva04g01678 582 MobiDBLite consensus disorder prediction 422 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01678 Bva-Chr4 17904482 17909782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01678 434 563 PHD Transcription Factor Family AT3G53680 55.385 9.27e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01678 - - gmx:100782217 918.687