LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva04g01671	ATGCATCACAGCCATACACGTGGCAGCAGCCACTCCTCAAACCATGCATCAGACAAAGTCTTACCGGACACCGAGACGACCGGTTCCTTAGCCGTTAATTCAGTGGGAAACCCAGGAGAGGCAAGCCAACCTGATGTAATCAGAGCAGCATTTGCAGAGTTCTTCTCCATgcttatttttgtctttgctGGAGAAGGTTCTGGCATGGCTTATAACAAATTGACAGACAATGGTCCTGCAACGCCTGCTGGTCTTATAGTAGCCTCATTATCTCATGCATTTTCACTTTCTGTGGCCGTATCTGTTGGGGCAAACATCTCTGGAGGTCACGTAAACCCTGCAGTCACATTTGGTGCCTTTATAGGAGGAAACATAACCCTGTTGAGGGTTATTTTGTATTGGATTGCGCAATTGCTTGGTTCAGTTGCTGCTTGCTTGTTGCTCAAGTATGCTACTGGTGGATTGGAAACTGCGGCCTTTTCTCTATCCTCTGGAGTGTCTGTTTGGAATGCTCTACTTCTTGAAATTGTAATGACCTTTGGATTGGTACTTACAGTTTATGCCACAGCAGTAGATCCAAAGAAGGGAAATGTGGGTGTTGTTGCCCCAATTGCCATAGGGTTCCTTGTGGGTGCCAACATTTTAGCTGGTGGAGCCTTTGATGGTGCATCCATGAACCCAGCTGTGTCATTTGGCCCTACTGTGGTCAGTGGCTCATGGGACCATCACTGGGTCTATTGGTTTGGTCCACTCATTGGTGCAGGAATTGCAGCCGTAGTTTATGATAATATCTTTATTGGAGACGATGGTCATGAAGCTCTTGTCCACAGTGACTTCTA	839	0.4589	MHHSHTRGSSHSSNHASDKVLPDTETTGSLAVNSVGNPGEASQPDVIRAAFAEFFSMLIFVFAGEGSGMAYNKLTDNGPATPAGLIVASLSHAFSLSVAVSVGANISGGHVNPAVTFGAFIGGNITLLRVILYWIAQLLGSVAACLLLKYATGGLVLL	158

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva04g01671	158	Pfam	Major intrinsic protein	41	154	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bva04g01671	158	MobiDBLite	consensus disorder prediction	1	41	-	-
	Bva04g01671	158	ProSitePatterns	MIP family signature.	110	118	IPR022357	-
	Bva04g01671	158	SUPERFAMILY	Aquaporin-like	42	155	IPR023271	-
	Bva04g01671	158	Gene3D	Glycerol uptake facilitator protein.	32	157	IPR023271	-
	Bva04g01671	158	PANTHER	AQUAPORIN-8	34	155	IPR034294	-
	Bva04g01671	158	MobiDBLite	consensus disorder prediction	10	40	-	-
	Bva04g01671	158	PRINTS	Major intrinsic protein family signature	48	67	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bva04g01671	158	PRINTS	Major intrinsic protein family signature	129	148	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bva04g01671	158	PRINTS	Major intrinsic protein family signature	92	116	IPR000425	GO:0015267\|GO:0016020\|GO:0055085
	Bva04g01671	158	PANTHER	AQUAPORIN TIP1-1	34	155	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva04g01671	Bva-Chr4	17816424	17819056	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva04g01671	34	155	Major Intrinsic Protein MIP	AT4G01470	82.787	6.74e-69	207

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva04g01671	K09873		-	gmx:100788583	214.542