Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01669 ATGATGATATCGAGGGGGCTGTTTGGGTTGTCTCCACCCCATATACAGCCGCTTACGCCGGTGTCGGAGGTCTCTGAACCGCCGGAGTCTCCGTCTCCGTACTTGGACCCTGGTGCGGAGACTTCGGCGTCGCAGCAAGTCGAGCTCGAGGAGGAGGTTGAGGAGCCTGAGGAGATTGAGCCGCCGCCAGCTGCCGTCCCTTTCTCCCAGCTCTTCGTTTGCGCCGACCGGCTTGACTGGGTTTTGATGATTGTTGGCTCGCTCGCCGCCGCCGCACATGGTACGGCTCTCGTCGTGTACTTGCACTACTTCGCGAAGATTATTCAAGTGCTGAGGATGAGACCTGATCAATCACAGGAGCAGTTTGATAGGTTTATGGAGCTTGCTTTAATCATTGTTTATATTGCTGTGGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCATGCTGGATTCTGACTGGGGAACGTCAGACTGCTGTCATCAGGTCAAAGTATGTTCAAGTATTACTTAACCAAGACATGAGTTTTTTTGACACTTATGGGAATAACGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAAGTTGgaaattatattcataataTGGCTACATTCTTCAGTGGTCTAGTTATTGGATTGCTCAACTGTTGGCTGATTGCGTTGATAACATTAGCAACTGGTCCATTTATTGTTGCTGCAGGAggaatatcaaatatattccTCCATAGGCTTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCTAGCATTGCTGAACAgGCAGTTTCCTATATAAGGACATTGTATGGATTCACCAATGAAACATTGGCTAAGTATTCATATGCAACATCACTTCAGGCTACTCTTAGATATGGAATCTTAATAAGTCTTGTCCAAGGACTTGGACTTGGATTTACTTATGGCCTTGCAATATGTTCATGCGCATTACAACTCTGGGTTGGAAGGTTTTTGGTTATGCATGGAAGAGCTCATGGTGGTGAAGTCGTAACAGCTCTGTTTGCTATAATTTTAAGTGGACTAGGATTGAATCAGGCAGCAACAAATTTCTACTCATTTGATCAAGGACGTATTGCTGCTTATAGACTATTTGAGATGATAAGCAGGTCATCCTCTTCTGTTAATCATGATGGAACTACCCCAGATTCTGTACAGGGAAACATAGAGTTTCGGAACGTATATTTCAGCTATCTGTCTCGTCCTGAAATCCCTATCTTGAGTGGGTTCTATCTTTCTGTACCCGCTAAGAAAGCTGTGGCACTTGTTGGTAGAAATGGCTCTGGAAAAAGTAGTATCATTCCACTTATGGAGCGTTTCTATGATCCTACATTAGGAGAAGTTCTTTTGGATGGTGAGAACATCAAGAATCTGAAACTGGAATGGCTGAGAAGCCAAATAGGACTAGTTACCCAGGAGCCTGCTTTGCTTAGTTTGAGTATCAGAGACAACATTGCTTATGGGAGGGATGCCACAATGGATCAAATTGAAGAGGCTGCTAAAATAGCACATGCACATACATTTATCAGCTCTTTAGAGAAAGGTTATGACACACAGGTTGGCAGGGCTGGTTTAGCATTGACAGAAGagcagaaaataaaactttctaTCGCAAGAGCTGTGCTTTTAAATCCTTCAATTCTTCTGCTTGATGAGGTGACTGGTGGACTTGATTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTCTGGATCTCCTTATGTTGGGACGCTCTACAATAATAATTGCTCGAAGGCTTAGCCTCATAAGGAATGCTGATTTTATAGCTGTTATGGAGGAAGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTGAACCTGGATGGCTTATATGCAGAACTTCTTCGATGTGAAGAGGCAGCCAAACTTCCCAAGAGGATGCCTGTGCGGAACTATAAGGAGACTGCAGCTTTCCAAATCGAGAAGGATTCTTCAGCAAGTCATAGTTTCAAAGAACCTTCATCCCCTAAAATGATGAAGTCACCTTCTCTTCAGAGAGTTTCTAATGTATTCCGATCTTCAGATGGTATCTTTAATTCACAGGAATCACCAAAAGTTCGGAGCCCACCACCTGAGAAGATGTTGGAAAATGGTCAGTCTTTTGATTCGGAGAAGGAACCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGATTGCCAGAGTTACCCAAGATTGATGTGCAGGCTGTGCATCGACAAACATCAAATGGTTCTGACCCAGAGTCCCCTGTTTCACCTCTCTTAACGTCTGATCCTAAAAATGAACGGTCCCATTCACAGACTTTTAGTAGACCCCATAGTCATTCTGACGATTTTTCAATGGAGAGAGAAGTAAAGGATACACGGTATCGAGAACCACCATCATTTTGGAGACTGGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGTATAGGTGCTGCGATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCTTGGTGGTGACAGCTTACTATAGAATTGATGAAGGTGATGATCACTTGAGAAAGGAGGTTGACAAGTGGTGCTTGATCATTGCCTGCATGGGTGTTGTGACAGTTGTTGCTAACTTTTTGCAGCATTTTTACTTTGGTATAATGGGGGAGAAAATGACTGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGCCTGGCAAATGATGCTACATTTGTACGAGCTGCTTTTAGTAATCGACTTTCTATATTTATACAAGATAGTGCTGCAGTTCTTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTGGCACTTGTGGCTTTAGCAACCCTTCCAATTCTCACTGTTTCTGCCATTGCCCAGAAATTATGGCTtgccggattttcaaggggcATACAAGAAATGCACAGAAAGGCATCTTTGGTTCTCGAAGATGCAGTTAGAAACATTTACACTGTTGTAGCATTTTGTGCTGGTAACAAGGTAATGGAGCTCTATAGGCTACagttaaacaaaatatttaagcaGAGCTTTCTTCATGGGATCGCAATTGGTTTTGGATTTGGCTTTTCCCAGTTTCTACTTTTTGCTTGTAATGCTCTTCTGCTTTGGTACACTGCGCTATGCATAAAAAGAGGCTACACTGATCCATCTACTGCACTCAAAGAATACATGGTTTTCTCTTTCGCAACATTTGCTCTTGTGGAGCCTTTTGGATTGGCCCCATACATACTCAAACGGCGTAAATCCCTGGTTTCAGTGTTTGAAATAATAGATCGGGTTCCTAAAATTGATCCTGATGATAACTCTGCTCTGAAGCCTCCAAATGTATATGGAAGCATCGAGTtgaaaaatgttgatttttgTTACCCTACTCGTCCAGAAGTATTGGTATTGAGCAATTTTACTCTCAAAGTGAATGGGGGGCAGACGGTTGCTGTTGTAGGAGTTTCAGGTTCAGGAAAGAGCACTATAATATCTTTGATTGAGAGATTTTATGATCCTGTTGCTGGCCAAATTTTCCTAGATGGGAGGGATTTAAAGCTCTATAATTTGAGATGGTTGAGGAGTCACCTTGGTCTTGTTCAGCAGGAACCTATTATCTTTTCAACAACAATAAGGGAAAACATCATATATGCAAGGCATAATGCCAGCGAATCTGAGATGAAAGAGGCAGCAAGAATAGCAAATGCTCACCATTTTATTAGCAGCTTGCCTCATGGTTATGACACCCATGTTGGAATGAGAGGTGTTGACTTAACCCCCGGGCAGAAACAGCGAATCGTGATTGCAAGGGTAGTGCTGAAGAATGCACCTATCCTGTTATTGGATGAAGCAAGCTCATCAATTGAATCTGAGTCAAGCAGAGTGGTGCAAGAGGCTCTAGACACCCTAATAATGGGAAACAAAACTACCATCCTCATAGCGCATCGGGCGGCAATGATGAGACATGTAGACAACATAGTAGTTCTCAATGGAGGAAGGATAGTGGAAGAAGGGTCCCATGATTCATTAGTGGCAAAGAATGGTCTATATGTCCGCTTGATGCAACCTCACTTTGGTAAGGCATTACGCCAACATCGGCTTGTTTA 4202 0.421 MMISRGLFGLSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASQQVELEEEVEEPEEIEPPPAAVPFSQLFVCADRLDWVLMIVGSLAAAAHGTALVVYLHYFAKIIQVLRMRPDQSQEQFDRFMELALIIVYIAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGLLNCWLIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYGFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHGRAHGGEVVTALFAIILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNHDGTTPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLSVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADFIAVMEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMMKSPSLQRVSNVFRSSDGIFNSQESPKVRSPPPEKMLENGQSFDSEKEPSIKRQDSFEMRLPELPKIDVQAVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSHSDDFSMEREVKDTRYREPPSFWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDEGDDHLRKEVDKWCLIIACMGVVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVLVAVLIGALLHWRLALVALATLPILTVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGIAIGFGFGFSQFLLFACNALLLWYTALCIKRGYTDPSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLVSVFEIIDRVPKIDPDDNSALKPPNVYGSIELKNVDFCYPTRPEVLVLSNFTLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQIFLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASESEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIVIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGSHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01669 1400 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1396 - -
Bva04g01669 1400 Gene3D ABC transporter type 1, transmembrane domain 70 658 IPR036640 GO:0005524|GO:0016021
Bva04g01669 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 639 IPR027417 -
Bva04g01669 1400 SUPERFAMILY ABC transporter transmembrane region 71 380 IPR036640 GO:0005524|GO:0016021
Bva04g01669 1400 PANTHER ABC TRANSPORTER B FAMILY 19 1396 - -
Bva04g01669 1400 Pfam ABC transporter 1169 1317 IPR003439 GO:0005524
Bva04g01669 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 372 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01669 1400 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 380 - -
Bva04g01669 1400 Gene3D ABC transporter type 1, transmembrane domain 941 1140 IPR036640 GO:0005524|GO:0016021
Bva04g01669 1400 MobiDBLite consensus disorder prediction 755 779 - -
Bva04g01669 1400 Gene3D - 1141 1388 IPR027417 -
Bva04g01669 1400 Gene3D - 395 642 IPR027417 -
Bva04g01669 1400 SMART AAA_5 1178 1365 IPR003593 -
Bva04g01669 1400 SMART AAA_5 432 617 IPR003593 -
Bva04g01669 1400 Pfam ABC transporter 426 570 IPR003439 GO:0005524
Bva04g01669 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1140 1387 IPR027417 -
Bva04g01669 1400 MobiDBLite consensus disorder prediction 780 801 - -
Bva04g01669 1400 CDD ABC_6TM_Pgp_ABCB1_D2_like 822 1134 - -
Bva04g01669 1400 Coils Coil 251 271 - -
Bva04g01669 1400 Pfam ABC transporter transmembrane region 832 1096 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01669 1400 Pfam ABC transporter transmembrane region 84 355 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01669 1400 MobiDBLite consensus disorder prediction 666 734 - -
Bva04g01669 1400 MobiDBLite consensus disorder prediction 14 62 - -
Bva04g01669 1400 MobiDBLite consensus disorder prediction 755 801 - -
Bva04g01669 1400 MobiDBLite consensus disorder prediction 666 709 - -
Bva04g01669 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1151 1388 IPR003439 GO:0005524
Bva04g01669 1400 SUPERFAMILY ABC transporter transmembrane region 813 1136 IPR036640 GO:0005524|GO:0016021
Bva04g01669 1400 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1120 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01669 1400 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 405 640 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01669 Bva-Chr4 17800578 17811603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01669 53 698 Calmodulin-binding Proteins AT2G36910 43.731 4.84e-170 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01669 K05658 - gmx:100779000 2425.2