Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01664 ATGGTGGGTAAGGAAGATGCTCGAGCTCCATGCCAGCTTTCCGGCAACCGGAAAATGTTTTGGCGGTCCGCTTCTTGGTCCTCTTCCCGTTCCGCCTCTCACAACCCGGACGGTGAGGAAAAGGAATTTGCAGATCCAGATGGTAATATTGGCAATACCAATGGGCAAACTCGTAGGTATCCTCCTACTCCGTTAACCCCTCGATCGCAACATAGTAGCAAGGCTCGGTCTTGTTTGCCGCCGTTACAGCCACTGTCGATTGCTCGGAGGAGCTTGGATGAGTGGCCCAAAGCAAGTTCGGATGATATTGGTGAGTGGCCAGTGCCACAACCCTCTACACCAAGTGGAAGAGGAAGCGGGGAAAGGTTGAAGCTTGATTTGTCGTCAATTCAGAGAAACCCAGATAAGAATGGAGGGCTTGTGAAGAGAGATAAGATTGCTTTCTTTGATAAAGAATGCTCAAAAGTTGCTGAACATATATACCTTGGTGGAGATGCTGTTGCCAGAGACAGGGATATATTGAAACAGAATGGGATTACCCATATTCTGAACTGTGTGGGTTTTGCTTGTCCCGAGTACTTCAAAGCCGATTTTATGTATAGAACATTGTGGTTGCAAGATAGTCCATCAGAGGATATCACTAGCATTCTCTATGACGTGTTTGACTATTTTGAAGATGTTAGGGAGCAAGGTGGAAGGGTGTTTGTGCATTGTTGCCAAGGCGTGTCTCGGTCCACATCTCTGGTGATTGCATACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCAGCTAGGGGCATTGCTGATCCAAATATGGGTTTTGCCTGCCAATTGTTACAATGCCAAAAAAGGGTCCATGCATTTCCGCTTAGCCCAAGCTCTCTGCTGAGAATGTATAGAATCGCCCCTCACTCTCCATATGATCCTTTGCATCTTGTCCCAAAAATGTTATCTGATCCTTCTTCATCTGCTCTGGACTCCAGAGGTGCATTTATCATTCATATACCTTCTGCAATATATGTTTGGATTGGTAAGAATTGTGATCCCATCATGGAAAGGGATGCCAGAGGAGCTGTTGGTCAGATTGTTCGGTATGAGAGAGTGCAGGGGCCCATTATAATGGTAGAGGAAGGTGAAGAACCAGGATGTTTTTGGGATgccttttcaaaaattttgccTTTGATGGACAAATCTGGCAATAGACTAGAAACTAGCAAATCAAGTATTAAGATTTGTCCAGGTGAGAGAAAGGTGGACTTATAtggtattgattttgaagtgTTCCAGAAAGCAATCATGGGAGGTTTTGTGCCTCCATTTGCATCATCTGAGGATGAGCATGAAACCCATCTTCCTGCTAGAGAGAGCAGTTGGAGTGTACTAAGGCGGAAATTTGCCTCTACCAATATGAGGGAGTTTGTGTCAGCACCTAAATTATCCTTTTCAAGGATTTATTCCGATTCCATGTTGTGTATCCATTCATCAACAAATTCATCACCATCCTCCTCCTTGCCGTTGTCATCGACTTCATCtttatcatcatcttcttcctcaccTGCTTACCTCTCTCCAGATTCAATTTCTTCTGATTCAAGCACTAATTCAAAGTATTGTTCGGAATTGTCCCTGGATTCTCCATCAGTATCTTCATCCTTGTCTAACTTCTCTAACTTATCCCTCCTTTCATCCAATTGTATTTCTCAAACAGTATCTAATAATGCAGAAATTCGTTCTGTCAATATTACATCACAACCTTGTTCTGTGTCAACCCCTTCAGAATTGAAAAAACCTTCAACTTCCCTTGCAGAGCGCAGGGGTAGTTTGTCAAAGTCTTTGAAGTTGTCACTGATGAATGAGAAGACCCGAATGATAAATAGATCAACAAGCCTTCATGTTAGTCGAGAAGATGATGCTGTTTTAAACAGCAACGTTAACCTTTCACATCAATCAAATAGTATAGACTGTTTATCTGAGTCTACCAACTATGTTGAGAAGAGAGGGTTGAATTCAATGCAACTGTGTGAGGCAGCATCATGTGCAGTTGCTACAGCTACAGTAAACTCATTTGTCAAAGGAGCAACTTTTACCGAGAATGGTAGTGAACCTTGGGTGGGTAGTTCCTCAGAAGAAGAACTCAAGTCTGATTCATCTAATGGAATTGATGAAAGTGCTTTATTacgatgtaatatggcacaaacTTTAGTATATCGTTGGCCTAGTTTTGAGAAGATTGCGAAATTCGGTGCAAGTCATATGGATTCTAAAgctgtttttgttattttctccCTAAGTACAAGTAAAAACGCAGAAAGTATTCTATACTTTTGGGTGGGGCGGTCATTCGACTGTGATATATCTCAGGTTCAGTTAGATAGTGATAGAGAATCTGATTACCTACGAGGGCATGACTGGAATCAAATTGGTCGTGATGTCCTTGCACAGTTTGGTTTGCCAAAGGATACAAACATCAAGATTGTTAAAGAGAATGAAGAACCAGCAGAGTTCCTAGCTTTTCTGAAATACCAGCGAGGAGGTTGCTTCTCAGTCCATGCAAGCTA 2579 0.4114 MVGKEDARAPCQLSGNRKMFWRSASWSSSRSASHNPDGEEKEFADPDGNIGNTNGQTRRYPPTPLTPRSQHSSKARSCLPPLQPLSIARRSLDEWPKASSDDIGEWPVPQPSTPSGRGSGERLKLDLSSIQRNPDKNGGLVKRDKIAFFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFACPEYFKADFMYRTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLSDPSSSALDSRGAFIIHIPSAIYVWIGKNCDPIMERDARGAVGQIVRYERVQGPIIMVEEGEEPGCFWDAFSKILPLMDKSGNRLETSKSSIKICPGERKVDLYGIDFEVFQKAIMGGFVPPFASSEDEHETHLPARESSWSVLRRKFASTNMREFVSAPKLSFSRIYSDSMLCIHSSTNSSPSSSLPLSSTSSLSSSSSSPAYLSPDSISSDSSTNSKYCSELSLDSPSVSSSLSNFSNLSLLSSNCISQTVSNNAEIRSVNITSQPCSVSTPSELKKPSTSLAERRGSLSKSLKLSLMNEKTRMINRSTSLHVSREDDAVLNSNVNLSHQSNSIDCLSESTNYVEKRGLNSMQLCEAASCAVATATVNSFVKGATFTENGSEPWVGSSSEEELKSDSSNGIDESALLRCNMAQTLVYRWPSFEKIAKFGASHMDSKAVFVIFSLSTSKNAESILYFWVGRSFDCDISQVQLDSDRESDYLRGHDWNQIGRDVLAQFGLPKDTNIKIVKENEEPAEFLAFLKYQRGGCFSVHAS 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01664 859 CDD DSP 153 287 - -
Bva04g01664 859 MobiDBLite consensus disorder prediction 503 537 - -
Bva04g01664 859 Gene3D Severin 303 398 IPR029006 -
Bva04g01664 859 SUPERFAMILY Actin depolymerizing proteins 299 402 - -
Bva04g01664 859 MobiDBLite consensus disorder prediction 22 121 - -
Bva04g01664 859 ProSitePatterns Tyrosine specific protein phosphatases active site. 236 246 IPR016130 GO:0016311|GO:0016791
Bva04g01664 859 ProSiteProfiles Dual specificity protein phosphatase domain profile. 152 294 IPR020422 GO:0006470|GO:0008138
Bva04g01664 859 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 211 272 IPR000387 GO:0016311|GO:0016791
Bva04g01664 859 SMART VILL_6 301 398 IPR007122 GO:0051015
Bva04g01664 859 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 843 - -
Bva04g01664 859 PANTHER MKPA PROTEIN 1 843 - -
Bva04g01664 859 MobiDBLite consensus disorder prediction 49 79 - -
Bva04g01664 859 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 147 293 IPR029021 -
Bva04g01664 859 SMART dsp_5 152 291 IPR020422 GO:0006470|GO:0008138
Bva04g01664 859 Gene3D Protein tyrosine phosphatase superfamily 140 294 IPR029021 -
Bva04g01664 859 Pfam Dual specificity phosphatase, catalytic domain 160 290 IPR000340 GO:0008138|GO:0016311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01664 Bva-Chr4 17780745 17785920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01664 1 189 Protein tyrosine phosphatase (PTP) family AT3G55270 65.979 2.82e-74 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01664 - - mtr:MTR_7g023250 1060.06