Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01637 ATGCAGCTGGGAGACCCAGGTGTATTAGTGCCCTCCTCCGGCGAATCCGTGATGGCGGTGACGGCGGCCCCCGAAGCGGCGCACGAAGGAGACAACGGCGGCGACATGATTGGCATGGACACAAATTCAGGTGAAGAAGATAAAGCCATGATAAGAGCAGATGAACTTGGTGACAGCAAGATCAACTTTGGAGGAAACCGGTGGCCCCGCCAAGAAACTTTGGCACTCTTGAAGATAAGGTCAGATATGGACTCTGCGTTTAGAGATTCAAGTCTTAAAGGTCCACTCTGGGAAGAAGTttcaagcaAAATGGCAGCACTTGGCTACCACCGCACCGCCAAGAAGTGcaaagagaaatttgagaacGTGTACAAGTATCACAAGAGAACCAAAGATAGCAGAAGTGGGAaaccagaaagaaaatcatatagATTCTTTGATCAATTACAAGCCCTCGAGAATCATCAATTCACAGTCTCCAATCATCGTAacccaacaacaacaacattaACAACAACAAAACCTAGTGATCGTAATACCACAACTGTTTCCTATGTTACCACTGTTCCAACCACAAACCCTACAgttataatttcttcttcaccaCCACCAACCAATGCCACCACCATCACTTCATTGACACCCATTAACAACAACAACCCTAGAAACCCATCACCACAGATCAGTGTcccctctttttctcttcccaATATGAACACTCTCTTCTCTACTACCTCCACGTCTTCGTCCACGGCTTCGGACGAAGACTTGGAGGAGAGGTataggaagaagaggaagtgGAAAGATTACTTTAGGAGGCTCACCAGGCAGGTGCTAGCGAAGCAAGAGGAGATGCAGAAGAGATTCTTGGACGCCATTGATAAGAGAGAACGAGAGCGTGTGGCTCAGCAAGAAGCTTGGAGGATGCAAGAAATGGGGAGGATTAATAGGGAGCATGAGATTCTTGTACAAGAACGATCAACGGCGGCTGCGAAGGATGCTGCGGTTATTGCATTTTTACAGAAGTTATCTGGGCAGCAGAACCCGACACCAGTTGGTAGTTTACTCCACCATCAACCCCAGCCGCAGCCACAGGTACAGCCTCTAATGCCAACACCACAACCTATATCACAAGTTCAACCCCAACGGCCGCCGGTGGCCGCCCTGGTGGCGCCAAACCACCATTTTGAAGCCCAGAAACTGAAGAACGGTGACAATGCTGCCGCTGCATTAACTCCGATGAGCTCGTCCCGGTGGCCGAAGGCGGAGGTTCATGCTTTGATTAGGCTGAGAACGAGTCTGGATAACAAGTACCAAGAGAATGGGCCAAAGGGTCCGTTGTGGGAAGAGATATCAGCTGGCATGCATAGGCTTGGATACAATAGAAGTGCTAAAAGGTGCAAAGAGAAATGggaaaatatcaacaaatacttcaagaaaatgaaagagagtACCAAGCAGAGGCGCGAGGATAGCAAGACATGCCCTTATTATCACGAGCTCGAAGCTTTATACAATGAAAAGAGCAAAACCCAGAATCTGTTTGGTGCTGCATTTGATAGTTTGAAGCCGAATGAGATGATGGAGCCATTGATGGTGCAACCGGAGCAGCAATGGCGGCCACCTCCTCAATACGATCAGCAGCAGCAAGCCATGGAAGAGGGAATGGTAGGAGAAAATAATGCAAGTGAATTACatcaagagaaacaaaaagagatcGATCAcgatggagaagaagaagatgatgtaATGGAAGAAGATAGTgtggaagatgaagaaggagGAGCTGGCAGTTATGAGAATGTGACAAATAAACTCTCTTCAGTGGGCACCGTTGGATG 1841 0.428 MQLGDPGVLVPSSGESVMAVTAAPEAAHEGDNGGDMIGMDTNSGEEDKAMIRADELGDSKINFGGNRWPRQETLALLKIRSDMDSAFRDSSLKGPLWEEVSSKMAALGYHRTAKKCKEKFENVYKYHKRTKDSRSGKPERKSYRFFDQLQALENHQFTVSNHRNPTTTTLTTTKPSDRNTTTVSYVTTVPTTNPTVIISSSPPPTNATTITSLTPINNNNPRNPSPQISVPSFSLPNMNTLFSTTSTSSSTASDEDLEERYRKKRKWKDYFRRLTRQVLAKQEEMQKRFLDAIDKRERERVAQQEAWRMQEMGRINREHEILVQERSTAAAKDAAVIAFLQKLSGQQNPTPVGSLLHHQPQPQPQVQPLMPTPQPISQVQPQRPPVAALVAPNHHFEAQKLKNGDNAAAALTPMSSSRWPKAEVHALIRLRTSLDNKYQENGPKGPLWEEISAGMHRLGYNRSAKRCKEKWENINKYFKKMKESTKQRREDSKTCPYYHELEALYNEKSKTQNLFGAAFDSLKPNEMMEPLMVQPEQQWRPPPQYDQQQQAMEEGMVGENNASELHQEKQKEIDHDGEEEDDVMEEDSVEDEEGGAGSYENVTNKLSSVGTVG 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01637 613 Gene3D - 68 129 - -
Bva04g01637 613 Gene3D - 419 480 - -
Bva04g01637 613 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-2 4 602 - -
Bva04g01637 613 MobiDBLite consensus disorder prediction 577 594 - -
Bva04g01637 613 MobiDBLite consensus disorder prediction 536 613 - -
Bva04g01637 613 MobiDBLite consensus disorder prediction 161 181 - -
Bva04g01637 613 CDD GT1 66 131 - -
Bva04g01637 613 Pfam Myb/SANT-like DNA-binding domain 417 504 IPR044822 -
Bva04g01637 613 Pfam Myb/SANT-like DNA-binding domain 66 152 IPR044822 -
Bva04g01637 613 MobiDBLite consensus disorder prediction 540 556 - -
Bva04g01637 613 ProSiteProfiles Myb-like domain profile. 60 124 IPR001005 -
Bva04g01637 613 SMART sant 415 477 IPR001005 -
Bva04g01637 613 SMART sant 64 126 IPR001005 -
Bva04g01637 613 CDD GT1 417 482 - -
Bva04g01637 613 PANTHER - 4 602 - -
Bva04g01637 613 ProSiteProfiles Myb-like domain profile. 411 475 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01637 Bva-Chr4 17512045 17515720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01637 63 539 Trihelix Transcription Factor Family AT1G76880 51.417 3.01e-143 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g01637 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01637 - - gmx:100799041 680.248