Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01636 ATGCTGGGGGACTCAGCTGTGTTGGGAGAAGTAGCAAGCTCTGGAGATGCGGCGGCGGCTGCAGTAGCCGCCACATCAGCGCCAGCAGCAACAACCACCACCATATCAGTCCATGAAGGCGCTGAGTCGGTGGTAGCAGCAGGAAGTGCTGCTGGTGTTGGATCAAATTCGGGTGATGAAGATAGAGCCAGAGGGGAAGAGGGTGACCGGAGTTTCGGCGGTCACCGGTGGCCTCGGCAGGAAACCTTAGCGCTTCTGAAAATACGGTCAGATATGGACGTTGCGTTTCGAGACGCCAGTGTTAAGGGTCCGTTGTGGGAAGAAGTTTCCAGGAAGCTAGCAAAGCTGGGATACCATAGAAGTGCCAAGAAGTGCAAAGAGAAATTCGAGAACGTTTACAAGTACCACAAGAGAACAAAGGAAGGCAGAAGTGGGAAATCAGATGGGAAAACATATCGGTTTTTTGATCAATTAGAAGCTCTTGAGAATCACCCTTCAATTCAATCCACAACGACGTCATCTAAAGCAGAAACAGCTCTACCAGCATCGCCAGTATCAGTAGTAGCAGCAACAGTTCCAACAACAGTGCTATTGCCAATGGCACCAGTGGCTAACACCACTCCAGCCCATGTCACTGTTCCATCAACAACCAACACACTTCCTGCGGCCATGGCTATGCCTATGGCCCAAGGCATTATCACCCAACCATTGATGAACCCCGCCATTCCTTCGTTTCCTCCTCCGAGTTTCCAACCATCAACAGCAAACCCTACAATCCCATCTCCATTTCCAAGCATCCCAGCTGATCTTCTTTCCAATTCTAGCTCTTCTTCCACCTCCTCCGACGAAACGCTGGAAGGGAGGCGGAAGAGGAAGCGGAAATGGAAGGACTTCTTTGAGAGGCTAATGAAGGAGGTGATAGAGAAGCAAGAGGAGTTGCAGAAGAGATTCTTGGAAGCAATAGAGAAACGCGAGCACGAGAGAATGGTTCGAGAGGAAGCTTGGAGAATGCAGGAACTGGCGAGAAtcaatagagagagagagattttggCACAAGAGAGATCCATGGCAGCTGCTAAAGATGCAGCTGTAATGGCATTTTTGCAGAAGATAGCGGAACAACAGAATCTTGGGCAAGCATTGAATACCATTAACATTCCTCAGTTGCAGCCGCAAGCGGTGGCACCGCCTGCTGCATCTCCACTGCCAGTGCAACAAGTTGCTGTTCAACAATATTCTCAGCCTCATCCTCAAGCGGGCCCACCTATGGGACTGACAGCAGCCGCACAGGCGCTGCAGCAGCAGCAGGTAACCACTATGGAAATTACCAAAACAGATAATGGGGATAACTTCGTGGGTGCTAGCTCTTCAAGATGGCCGAAAGTGGAGGTTGAGGCATTGATAAAGCTACGAACGGAAATGGACTCTAAGTACCAAGAGAATGGACCAAAAGGCCCTCTGTGGGAAGATATCTCGGCCGCCATGAGAAAGCTCGGGTACAACCGCAACGCCAAAAGGTGCAAAGAGAAATGGGAGAATATCAACAAGTACTTcaagaaagtgaaagaaagcAACAAGAAGAGACCAGAAGATTCCAAGACTTGCCCTTATTTTCATCAGCTGGATGCTCTATataggaagaaaaacaagCTGGATAACAATAATCCAGCCTCATCCGCCGTCATGCAGCCACCGGAGGACGTCACTATGAACATGAACATGATGACGCCGTTGATGGTCCGGCCGGAGCAGCAATGGCCGCCTCAGCAGAACACTCGGCCGGGGACCGGCCCCGATATCACCATGGAAGAAGCCCAGAACGACCCGATGAACCGGCACAACGAGGACGAAGACGAAGATGACGAAGACAAAGATggagatgaagatgatgaagaagacgAAGGAGGAGGTAACTATGAGATAGTGGCAAGCAAGCCAGCTTCAGTGGGTGCAGGTGCATCAGCAGAGTG 1970 0.4873 MLGDSAVLGEVASSGDAAAAAVAATSAPAATTTTISVHEGAESVVAAGSAAGVGSNSGDEDRARGEEGDRSFGGHRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAKLGYHRSAKKCKEKFENVYKYHKRTKEGRSGKSDGKTYRFFDQLEALENHPSIQSTTTSSKAETALPASPVSVVAATVPTTVLLPMAPVANTTPAHVTVPSTTNTLPAAMAMPMAQGIITQPLMNPAIPSFPPPSFQPSTANPTIPSPFPSIPADLLSNSSSSSTSSDETLEGRRKRKRKWKDFFERLMKEVIEKQEELQKRFLEAIEKREHERMVREEAWRMQELARINREREILAQERSMAAAKDAAVMAFLQKIAEQQNLGQALNTINIPQLQPQAVAPPAASPLPVQQVAVQQYSQPHPQAGPPMGLTAAAQALQQQQVTTMEITKTDNGDNFVGASSSRWPKVEVEALIKLRTEMDSKYQENGPKGPLWEDISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYRKKNKLDNNNPASSAVMQPPEDVTMNMNMMTPLMVRPEQQWPPQQNTRPGTGPDITMEEAQNDPMNRHNEDEDEDDEDKDGDEDDEEDEGGGNYEIVASKPASVGAGASAE 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01636 656 MobiDBLite consensus disorder prediction 614 637 - -
Bva04g01636 656 MobiDBLite consensus disorder prediction 267 282 - -
Bva04g01636 656 ProSiteProfiles Myb-like domain profile. 457 515 IPR001005 -
Bva04g01636 656 MobiDBLite consensus disorder prediction 48 76 - -
Bva04g01636 656 MobiDBLite consensus disorder prediction 582 656 - -
Bva04g01636 656 ProSiteProfiles Myb-like domain profile. 76 133 IPR001005 -
Bva04g01636 656 SMART sant 455 517 IPR001005 -
Bva04g01636 656 SMART sant 73 135 IPR001005 -
Bva04g01636 656 MobiDBLite consensus disorder prediction 240 264 - -
Bva04g01636 656 Pfam Myb/SANT-like DNA-binding domain 75 161 IPR044822 -
Bva04g01636 656 Pfam Myb/SANT-like DNA-binding domain 457 544 IPR044822 -
Bva04g01636 656 Gene3D - 459 520 - -
Bva04g01636 656 Gene3D - 77 138 - -
Bva04g01636 656 CDD GT1 76 140 - -
Bva04g01636 656 Coils Coil 296 323 - -
Bva04g01636 656 CDD GT1 457 522 - -
Bva04g01636 656 MobiDBLite consensus disorder prediction 583 597 - -
Bva04g01636 656 MobiDBLite consensus disorder prediction 59 76 - -
Bva04g01636 656 MobiDBLite consensus disorder prediction 239 291 - -
Bva04g01636 656 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 24 645 - -
Bva04g01636 656 PANTHER - 24 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01636 Bva-Chr4 17491943 17495298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01636 66 586 Trihelix Transcription Factor Family AT1G76880 56.562 2.13e-169 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva04g01636 Myb_DNA-bind_4 2.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01636 - - lang:109354958 724.161