Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01628 ATGGATTTCATTGAAGGCGTGGGCGAGAGCTCCTCTCCACCGAGAACTTTCAGCGGTTTCAGCAACTATGATGTGAGAAACGATGTGTATGATCGTTTAGTGGAGAGTGGTCATGATCAAGCTGTGAGCAATCCCGAGTTTCGTGAACAGTTGGATGCTCACTTTAATCGGCTGCCTCCCAGTTATGGACTCGATGTTAACTTGGATAGAGTTGAAGATGTTTTATTACACCAGAGGCTTCTAGCATTGGCAAGGGACCCAGACAAGCGCCCTGTCTATCATATTCGTTTTCTGGAGCATATTAATACAAGAGTAGATGGTGAAGATCAGCAAATTATAAGTACTCTCTCTAGCCCAAGGCCCAATTCTGATGCAACTAATGGGGGCTCCGTGCCATCGCATAAAAGGACAAGAGATTCTGCAACTGAGTTTGAGCCTTGCTCTAAGCTTGAGGACCTAAATTTGGATGTCAGGAATAACTCCAAGGAGATGGAAGAAAGATTTCTTACCAAGAACATTTCCAAGAGCCAAGAACATTCAAATACACCAATTCATGAAGTCATATTTTCCAGCATTGATAAGCCAAAGCTTTTAAGCCAGCTGTCTGCTCTGCTATCTGATATAGGACTTAACATCCGTGAGGCTCATGTTTTTTCCACAACTGATGGGTACTCCCTGGATGTATTTGTGGTGGACGGATGGCAAGTAGAGGAAACAGATGGCTTATATGAGGCTATGGAAAAAGCAATAGCTAGAAGTGAGGGTTCATGGTCTCGATCTGTAAATTGCCATTCATCTGTTGAGAAGGCTCTGGCAGCAGAAGCAAAACCTGGTGATTGGGAAATCGACAGGAGGTTGTTAAGGATAGGAAAAAGAATAGCATCTGGGTCGTGTGGAGATCTGCATCATGGAGTCTATCTTGGTCAAGATGTTGCTGTGAAGATTATGAGATCTGAGCATTTGAATGATGCTTTAGAGGATGAGTTTGCTCAAGAAGTGGCAATTCTAAGCCAGGTACATCATAAAAATGTTGTTCGATTTATTGGTGCTTGTACAAAGTCTCCGCATTTGTGCATAGTAACAGAGTACATGCCTGGAGGAAGTCTATATGATTACTTGCATAAGAATCATAATGTTTTGGAGCTATCTCTACTGCTAAAGTTTGCTATTGATGTCTGCAAGGGTATGGAGTATTTGCACAAAAACAACATTGTTCACAGGGATCTGAAGACAGCGAATTTGTTGATGGACACCCAAAACgtTGTCAAGGTAGCAGATTTTGGAGTTGCTCGGTTCCTTAATCAAGGGGGAGTGATGACAGCAGAAACTGGAACATACAGATGGATGGCACCTGAGGTTATAAACCATCAACCCTATGATCAGAAAGCAGATGTTTTCAGTTTTTCCATCGTACTTTGGGAACTAGTGACAGCAAAGGTTCCATATGATACCATGACTCCACTACAAGCTGCTCTGGGTGTGAGACAGGGACTGCGCCCAGAACTTCCAAAGAATGGACACCCTAAGCTACTAGCTCTGATGCAGAGATGTTGGGAAGCGACTCCAAGCAACCGCCCATCCTTTTCTGAGATTACAGTTGAACTTGAAAATCTACTGCAAGAGGTTGAGTTGGGTAAATTGCAGAATGTTCCAGAAGCTAATGGTGATTG 1670 0.4317 MDFIEGVGESSSPPRTFSGFSNYDVRNDVYDRLVESGHDQAVSNPEFREQLDAHFNRLPPSYGLDVNLDRVEDVLLHQRLLALARDPDKRPVYHIRFLEHINTRVDGEDQQIISTLSSPRPNSDATNGGSVPSHKRTRDSATEFEPCSKLEDLNLDVRNNSKEMEERFLTKNISKSQEHSNTPIHEVIFSSIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWQVEETDGLYEAMEKAIARSEGSWSRSVNCHSSVEKALAAEAKPGDWEIDRRLLRIGKRIASGSCGDLHHGVYLGQDVAVKIMRSEHLNDALEDEFAQEVAILSQVHHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLELSLLLKFAIDVCKGMEYLHKNNIVHRDLKTANLLMDTQNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKNGHPKLLALMQRCWEATPSNRPSFSEITVELENLLQEVENVPEANGD 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01628 551 ProSiteProfiles ACT domain profile. 186 266 IPR002912 -
Bva04g01628 551 SUPERFAMILY ACT-like 184 252 IPR045865 -
Bva04g01628 551 Pfam Protein tyrosine and serine/threonine kinase 287 534 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 Gene3D Transferase(Phosphotransferase) domain 1 365 549 - -
Bva04g01628 551 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 545 - -
Bva04g01628 551 Coils Coil 147 167 - -
Bva04g01628 551 MobiDBLite consensus disorder prediction 114 135 - -
Bva04g01628 551 SMART serkin_6 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01628 551 CDD STKc_MAP3K-like 293 535 - -
Bva04g01628 551 Gene3D Phosphorylase Kinase; domain 1 276 364 - -
Bva04g01628 551 SUPERFAMILY Protein kinase-like (PK-like) 279 541 IPR011009 -
Bva04g01628 551 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bva04g01628 551 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 545 - -
Bva04g01628 551 MobiDBLite consensus disorder prediction 114 143 - -
Bva04g01628 551 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01628 551 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01628 Bva-Chr4 17368334 17388869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01628 24 545 MAP Kinase Kinase Kinase AT2G17700 50.933 4.65e-178 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bva04g01628 PK_Tyr_Ser-Thr 7.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01628 - - gmx:100782737 932.169