Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01618 ATGTATTTCCActctttacttttcttctgGGTCCCCGTCTTTCTCTTCACCAACCTCAGTTTTCCCTCAGTTTCTCTCCGTTTGTTGCCTTCAGAAAATATCACACTCTTCTCTGATGCCTATTTCGGAAACAATGCCATCAGTCTCACCCAAGAAGTGAGCTgcgtttcttcttcttctttatcatCATTACCCTCTTCTTCTGGGGTGGGAAGAGCATTCTATGCATACCCAATTCGATTTCTTGATTCTGAAACAAATTCCACATATTCTTTCTCAACCCGCTTCTCTTTCTCCATCTTCTCTTCCCCTCCGTGCTCTTCTGGTGATGGCATTGCCTTTCTTATCACTTCCACCACCGATATAGCCAGTCTCTCTCATGGATATATGGGTCTCCCAGCTCCTTCTTCGAACCCGCAAGATTCGTACTTAGCAGTGGAATTTGACACCAGTTTTGATCCTTCACTTGGTGACGTTAATGGGAATCACATTGGCATTGATGTGAACTCAGTCATATCTTACACTTCAGTGGATGCTATTTCTCGAGGAATTGATTTGAAGAGTGGGAATCATATTAATGCGTGGATAGAGTACAGAGATGACATGAAAATGGTCCGCATATGGGTTGGGTATGCTCCAACTAGGCCCCCGACACCAATTCTTGTTTCCCAAATTGATCTTTCTGAGGAGTTCAACGAGTTTATGCATGTGGGTTTTTCTGCCTCTAATGGGAAGGGTTCAGCTATTCACCTTGTTGATCATTGGCAGTTCAAAACTTTTAGCTCCCTTCATTCCGTGAGTCCTATGGATATGGTGGAAGAAGGGGATTGTTTCTTGTGCTATCCAGAAGCTTCAACTGCAATGGCTGAACCCATTGATCCCCATAACAGAAAGCAGATGAAAGAGGAGATGGCTTTTGGTTTTGGAGGTATAGCTGCATTTGTTGTTTCTGTGTTGGTTGTTGTGgttatcttcattttcttggcaaagaaaaatgattttgttaGAAAGACCAGAGATGGCCAGAATTGTAGAGTACAAACCTCTAAAGTGCCCACGAGATTGTCTCTTGCTGAGATAAAATCAGCCACAATGGGGTTTAATAGAGTTAGACTCGTTGGGGAAGGTGCATCAGCAAAGGTTTATAAGGGGTCTCTTCCATCTGGAAGAGATGTGGCAGTGAAAAGGTTTGAGAGGGTTGATGGTTTAAACTGTATCCGCAATCCTTTCACCACCGAGTTTGCCACAATGGTGGGTTGTTTAAGGCACAAGCATTTGGTTCAGCTTCAAGGATGGTGCTGTGAAGGGACTGAGTTAGTACTAGTGTATGAGTACCTACCCAATGGGAGCCTCAACAAAGTACTGCACAAGAACTTCGGTTCTGCAGTTGTCTTGACATGGAAGCAAAGGGTTAACATAATTATGGGGGTTGCTTCTGCTCTTACATATCTTCATGAAGAATGTGAGAGACAAATCATTCACAGAGATGTGAAGACTTGCAATGTAATGCTTGACGCCGATTTCAATGCAAAGCTTGGGGATTTTGGCCTAGCATCAGTTCACGAACATAGTTCTAACACAAGGGAAGCTACCATACCAGCCGGGACAGTAGGTTATCTTGCTCCGGAATATGTCTATTCTGGTGTTCCAACTGTGAAGACTGATGTATACAGCTTTGGCGTAGTGGTGTTAGAAGTGGCAACAGGGAGGAAGCCTGTTGAAGATGATGGCACTATACTTGTTGACTATGTGTGGAGCTTGtgggaaaagaagaaacttgtTGAGGCTGCTGATCCAAGGTTGATGGGTAAATTTGATGTGCCAGAGATGAAGAGGATGCTCATGGTGGGGCTTCTTTGTGTGCATCCTGACCATGACAAGAGGCCTAGAGTGAGAGAAGCGGCAAGGATTCTAAAGGAAGAAGCAACACTTCCATTGTTGCCAGCCAATAAACCAAGGGTCAAAATTAGACCTATTTTGCCCGATGATACTGAGGAGACACTGAATGTTATTGGAGATATGGCCAGTTCAGATGAAGCTCCATATATGACCCCCAGGAGCCACTTTAGCAAGGACTA 2078 0.424 MYFHSLLFFWVPVFLFTNLSFPSVSLRLLPSENITLFSDAYFGNNAISLTQEVSCVSSSSLSSLPSSSGVGRAFYAYPIRFLDSETNSTYSFSTRFSFSIFSSPPCSSGDGIAFLITSTTDIASLSHGYMGLPAPSSNPQDSYLAVEFDTSFDPSLGDVNGNHIGIDVNSVISYTSVDAISRGIDLKSGNHINAWIEYRDDMKMVRIWVGYAPTRPPTPILVSQIDLSEEFNEFMHVGFSASNGKGSAIHLVDHWQFKTFSSLHSVSPMDMVEEGDCFLCYPEASTAMAEPIDPHNRKQMKEEMAFGFGGIAAFVVSVLVVVVIFIFLAKKNDFVRKTRDGQNCRVQTSKVPTRLSLAEIKSATMGFNRVRLVGEGASAKVYKGSLPSGRDVAVKRFERVDGLNCIRNPFTTEFATMVGCLRHKHLVQLQGWCCEGTELVLVYEYLPNGSLNKVLHKNFGSAVVLTWKQRVNIIMGVASALTYLHEECERQIIHRDVKTCNVMLDADFNAKLGDFGLASVHEHSSNTREATIPAGTVGYLAPEYVYSGVPTVKTDVYSFGVVVLEVATGRKPVEDDGTILVDYVWSLWEKKKLVEAADPRLMGKFDVPEMKRMLMVGLLCVHPDHDKRPRVREAARILKEEATLPLLPANKPRVKIRPILPDDTEETLNVIGDMASSDEAPYMTPRSHFSKD 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01618 692 Gene3D Phosphorylase Kinase; domain 1 329 445 - -
Bva04g01618 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 262 IPR013320 -
Bva04g01618 692 Pfam Protein kinase domain 368 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01618 692 Gene3D Transferase(Phosphotransferase) domain 1 446 644 - -
Bva04g01618 692 CDD STKc_IRAK 373 640 - -
Bva04g01618 692 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Bva04g01618 692 SMART serkin_6 367 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01618 692 SUPERFAMILY Protein kinase-like (PK-like) 347 638 IPR011009 -
Bva04g01618 692 ProSiteProfiles Protein kinase domain profile. 367 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01618 692 Pfam Legume lectin domain 31 259 IPR001220 GO:0030246
Bva04g01618 692 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 27 656 - -
Bva04g01618 692 Gene3D - 16 272 - -
Bva04g01618 692 CDD lectin_legume_LecRK_Arcelin_ConA 33 260 IPR001220 GO:0030246
Bva04g01618 692 PANTHER - 27 656 - -
Bva04g01618 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01618 Bva-Chr4 17243685 17245763 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01618 2 690 Receptor kinase-like Gene Family AT5G42120 54.584 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Bva04g01618 Pkinase 1.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01618 - - qlo:115978027 942.184