Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01614 ATGATGAGGGAATTTTTGAGTATGTTCTGTGGTGAATCCGGTTGTTCAGACAGTGAGGGAATGCCTTGCGGTTTTGATTACAAACTTTGGAAAGATCCTCCTACATGTATAAATCACTTGTTAATCATCTGCGCTGATGTAATGCTTCTGCTCTTGCTCTTATTCATTGTTATGCTCAAGAAATCATCACCAAAACCATTTAAGGGTCATATCTGGGGACAAAGATATTCAAGTTTGCAGCTAGTTTCAGCTATAGCCAATGGATCTCTTGGCTTTTCGCATTTTTGTTTAGGCATTTGGATTTTAGAGGAGAAGGTGAGGCAAACGCACAATGCTTTTCCTCTCAGTTATTGGTTGCTAGAATTCTTTCAGGGCTTCACTTGGTTGTTGGTGGGTCTCACAGCAAGTCTTCGACTGTGGCAACTTCCAAGAGCATCGTTGTGTCTGCTCGGTGTTCTTGCTGTCTTGATTTCTGGTATCTTCTGTGCTTTATCCTTATTTTCTGTATTTGGCGAAAGAGAAATGTCCCTTAAGGTAGCTTTAGATGTTCTATGTTTTCCAGTAGCAATTTTAATGCTTGTGTGCACATATAAGGAATATAAGTATGAAAGCACCGATAGAGAGATCAATGAAGGCCTTTATACCCCCTTAAATGGAGAGTCCAATGGCATTGGTAAAATTAGTTCTGTTGAATGTGTAACACCATTTGCCAAAGCTGGATTCTTCAATAAAATGTCATTTTGGTGGTTGAATCCATTGATGAAAAGTGGTAAGGAGAAAACACTACAGGATGAAGATATCCCAAAGTTGGGTGAGGCAGATCAAGCAGAAAGTTGTTATTTGCTGTTTCAGGAACAACTGAacaaacagaaacagaaagaacCATCATCAGAGCCTTCAATTTTAAGgacaataattttatgtcaTCGCAGAGACATTTTGATAACTAGTTTCTTTGCATTGCTAAAGGTACTGACTATTTCTGCTGGTCCTCTACTTCTGAATGCCTTTATATTGGTTGCTCAGGGTAAAGAGAGTTTCAAATATGAAGGTTATGTGTTGGCCATATTACTTTTCTTAACAAAGTCCCTAGAATCCATATCACAAAGGCAGTGGTACTTTCGTAGCAGACTCATTGGTTTGAAAGTCAAGTCATTGCTTGCTGCTGCTATCTATAAGAAGCAGCTGAGATTATCCAATGCTTCTAGATTGGTACATTCTGGTGGTGAGATAATGAATTATGTGACTGTAGATGCATATAGAATTGGAGAATTCCCATTTTGGTTTCACCAGACTTGGACAACAAGTCTCCAACTATGTATTGCTTTAGTAGTTCTTCTCCAAGCTATAGGGAAAGCAACAATAGCTTCCATGGTGGTGGTAGTTATTACCGTGCTTTGCAATACTCCACTTGCTAAGTTACAGCATAAATTTCTGAGCAAACTTATGGTGGCCCAAGATGAGAGATTGAGGGCTAGTTCTGAAGCTCTTCTGAATATGAAAGTGCTGAAGTTATATGCATGGGAAACCCATTTTAAGAATGCTATAGAAAGCTTAAGAACAGAGGAGCTCAAATGGTTATCAGCAGTGCAGTTACAGAAGGCATACAACTCATTTCTGTTTTGGTCTTCTCCTGTTTTGGTTTCTGCTGCAACCTTTGGGGCCTGTTACTTCCTCAAAGTTCCTTTACATGCAAATAATGTTTTTACCTTTGTAGCTACTTTACGCCTTGTTCAAGATCCTATCAGAACCATACCGGATGTTATAGGCGTTGTCATTCAAGCAAAAGTTGCATTTACACGGATTGTGAAATTCCTTGAGGCACCAGAGCTGCTGAGTAGAAATGTCAAAAAGAAGAGCTTTAATGATATTCTGAATGGATCGATTTCAATCAAGTCTGCTGCCTTTTCatgggaagaaaatgaatcaaagcCCACACTGAGAGACACAAGTTTAGTGGTTATACCTGGGCAAAAGGTGGCTATATGTGGTGAAGTTGGTTCAGGAAAATCAACCCTCTTAGCAGCAATTCTTGGAGAAGTTCCTCGTACACAGGGAACTATTGAAGTTTACGGGAAGTTTGCCTATGTCTCTCAAACGGCTTGGATACAGACTGGCAGCATACGAGATAATATACTTTTTGGATCAGCTATGGTTGCAAAAAGATATCAAGAAACACTTGAGAGGTCTTCATTAATGAAAGATCTTGAGTTGTTTCCCCATGGTGATCTCACTGAAATAGGGGAAAGAGGAGTGAACCTGAGTGGAGGTCAGAAGCAACGAATTCAACTTGCTCGCGCCCTTTATCTGAATGCTGACATATATCTGTTGGATGATCCATTCAGTGCCGTCGATGCACATACAGCCACAGATTTGTTTAATGAGTATGTCATGGAAGGACTTAGAAGGAAGACAGTGTTACTTGTGACTCATCAAGTTGACTTCCTTCCAGCGTTTGATTCTGTTTTGTTGATGTCTGATGGGGAAATCCTACAAGCTGCTCCTTATCACCATCTATTGTCATCAAGCCAAGAATTTCAGGACCTTGTCAGTGCTCACAAGGAGACTGCTGGTACTGAAAGGCTTGTGGATGTTACTTTTGTGCAGAAACACATAAGTTCTGTGAAAGAGACTCGGAAAGCTTATGTGGAGAAGCAGTTTGAAGCATCTAAAGGGgatcaattaattaaggaagaagagagagaaagggggGACACTGGGTTTAAGCCTTACTTGCAATATCTGAATCAGAACAGGGGTTATATATACTTCTCTGTTGCTGCCCTTAATCAACTTGCATTTGTGATTGGTCAGATAGTACAGAACTCATGGATGGctgttaatgtggatgatccTCATGTTAACACATTGCAGTTAATCCTAGTGTACTTGTTGTTTGGAATTATTTCAACTCTTTTCTTGTTGATCAGTCGTCTTGCTGTTGTTGCTTTGGGTATTCAATCATCAAGATCTTTATTTTCACAGTTATTGAATTCCCTTTTTAGTGCACCAATGTCATTTTATGACTCCACGCCCTTGGGAAGGATTCTTAGTAGGGTCTCAGCAGATCTGAGCATTGTTGACCTTGATGTCCCATTCAGCCTCTTGTTTGCTGTTGGAGCCACATTAAACTGTTCTGCTAGTCTTACAGTTTTGGCAGTTATTACCTGGCAGGTGTTGTTTGTGTCCATACCAATGGTTTATATTGCAATTAGGTTGCAGAAATATTACTTCGCCTCTGCAAAAGAATTTATGCGAATGAATGGCACCACAAAATCCTTTGTAGCTAATCATCTAGCTGAATCTGTAGCTGGGGCTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGCTTTTTTGCTAAGAATCTCGACCTCATTGATGTCAATGCTAGTCCTTTCTTTCATAGTTTTGCAGCTAATGAGTGGTTGATTCAACGGTTAGAAACAATCAGTGCAGTTGTTCTTGCCTCTGCAGCACTTTGCATGGTTGTGCTTCCAACTGGGACTTTCTCGTCTGGATTTATTGGCATGGCTCTCTCATATGGACTTTCATTAAACATGTCCCTTGTATATTCAATACAAAACCAGTGCACCATagcaaattatataatatcagTTGAGAGGCTAAAtcaatatatgcatatatcaaGTGAGGCCCCAGAAGTCATAGAAGGAAATCGTCCCCCTATGAATTGGCCAGCTGTGGGAAAAGTAGTGATAAATGATCTGCAGATACGGTACCGGCTGGGTGCACCTCTTGTACTTCGTGGGATCACATGCACATTCAAAGGAGGACACAAGATTGCAATTGTTGGCAGGACGGGAAGCGGGAAATCCACACTAATCGGTGCTTTATTTCGTCTCGTGGAGCCAGCAGGCGGAGAGATTATTGTAGATGGCATCAACATTTCTTCTATTGGACTTCATGATTTGAGGTCGCGTTTTGGTATTATACCTCAAGATCCTACTCTTTTTAATGGGACAGTCAGATATAATTTGGACCCTCTGTCTCAACATTCTGATGAGGAGATATGGGagGTTCTTGGTAAGTGTCAGTTGCTAGAGGCtgtcaaagagaaagaaaatggattagACTCCTCAGTTGTGGAAGACGGATCGAACTGGAGCATGGGACAACGACAGTTATTCTGTTTGGGGCGTGCACTTCTGAGGAGAAGTCGGATATTGGTGCTTGATGAAGCAACTGCATCAATTGATAATGCAACTGATTTGATTCTGCAGAAAACCATCAGGACGGAGTTTGCAGATTGTACTGTTATCACTGTTGCCCACAGAATACCAACTGTGATGGATTGCACTATGGTTCTTGCTATAAGCGATGGAAAACTGATGGAGTATGATGAGCCAATGAACTTGATGAAGAGAGAAGGATCATTGTTTGGGCAGCTTGTGAAGGAGTACTGGTCACATTTTCAATCTGCAGAATCACATTG 4454 0.3943 MMREFLSMFCGESGCSDSEGMPCGFDYKLWKDPPTCINHLLIICADVMLLLLLLFIVMLKKSSPKPFKGHIWGQRYSSLQLVSAIANGSLGFSHFCLGIWILEEKVRQTHNAFPLSYWLLEFFQGFTWLLVGLTASLRLWQLPRASLCLLGVLAVLISGIFCALSLFSVFGEREMSLKVALDVLCFPVAILMLVCTYKEYKYESTDREINEGLYTPLNGESNGIGKISSVECVTPFAKAGFFNKMSFWWLNPLMKSGKEKTLQDEDIPKLGEADQAESCYLLFQEQLNKQKQKEPSSEPSILRTIILCHRRDILITSFFALLKVLTISAGPLLLNAFILVAQGKESFKYEGYVLAILLFLTKSLESISQRQWYFRSRLIGLKVKSLLAAAIYKKQLRLSNASRLVHSGGEIMNYVTVDAYRIGEFPFWFHQTWTTSLQLCIALVVLLQAIGKATIASMVVVVITVLCNTPLAKLQHKFLSKLMVAQDERLRASSEALLNMKVLKLYAWETHFKNAIESLRTEELKWLSAVQLQKAYNSFLFWSSPVLVSAATFGACYFLKVPLHANNVFTFVATLRLVQDPIRTIPDVIGVVIQAKVAFTRIVKFLEAPELLSRNVKKKSFNDILNGSISIKSAAFSWEENESKPTLRDTSLVVIPGQKVAICGEVGSGKSTLLAAILGEVPRTQGTIEVYGKFAYVSQTAWIQTGSIRDNILFGSAMVAKRYQETLERSSLMKDLELFPHGDLTEIGERGVNLSGGQKQRIQLARALYLNADIYLLDDPFSAVDAHTATDLFNEYVMEGLRRKTVLLVTHQVDFLPAFDSVLLMSDGEILQAAPYHHLLSSSQEFQDLVSAHKETAGTERLVDVTFVQKHISSVKETRKAYVEKQFEASKGDQLIKEEERERGDTGFKPYLQYLNQNRGYIYFSVAALNQLAFVIGQIVQNSWMAVNVDDPHVNTLQLILVYLLFGIISTLFLLISRLAVVALGIQSSRSLFSQLLNSLFSAPMSFYDSTPLGRILSRVSADLSIVDLDVPFSLLFAVGATLNCSASLTVLAVITWQVLFVSIPMVYIAIRLQKYYFASAKEFMRMNGTTKSFVANHLAESVAGAVTIRAFEEEDRFFAKNLDLIDVNASPFFHSFAANEWLIQRLETISAVVLASAALCMVVLPTGTFSSGFIGMALSYGLSLNMSLVYSIQNQCTIANYIISVERLNQYMHISSEAPEVIEGNRPPMNWPAVGKVVINDLQIRYRLGAPLVLRGITCTFKGGHKIAIVGRTGSGKSTLIGALFRLVEPAGGEIIVDGINISSIGLHDLRSRFGIIPQDPTLFNGTVRYNLDPLSQHSDEEIWEVLGKCQLLEAVKEKENGLDSSVVEDGSNWSMGQRQLFCLGRALLRRSRILVLDEATASIDNATDLILQKTIRTEFADCTVITVAHRIPTVMDCTMVLAISDGKLMEYDEPMNLMKREGSLFGQLVKEYWSHFQSAESH 1484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01614 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Bva04g01614 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1228 1465 IPR027417 -
Bva04g01614 1484 Gene3D - 606 873 IPR027417 -
Bva04g01614 1484 Gene3D ABC transporter type 1, transmembrane domain 886 1219 IPR036640 GO:0005524|GO:0016021
Bva04g01614 1484 Gene3D ABC transporter type 1, transmembrane domain 283 605 IPR036640 GO:0005524|GO:0016021
Bva04g01614 1484 Pfam ABC transporter transmembrane region 314 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01614 1484 Pfam ABC transporter transmembrane region 922 1181 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01614 1484 CDD ABC_6TM_ABCC_D2 920 1213 IPR044726 GO:0140359
Bva04g01614 1484 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524
Bva04g01614 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 932 1201 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01614 1484 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 72 1484 - -
Bva04g01614 1484 CDD ABC_6TM_ABCC_D1 315 602 IPR044746 GO:0140359
Bva04g01614 1484 SUPERFAMILY ABC transporter transmembrane region 302 607 IPR036640 GO:0005524|GO:0016021
Bva04g01614 1484 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
Bva04g01614 1484 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1240 1472 IPR003439 GO:0005524
Bva04g01614 1484 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 72 1484 - -
Bva04g01614 1484 SUPERFAMILY ABC transporter transmembrane region 922 1221 IPR036640 GO:0005524|GO:0016021
Bva04g01614 1484 CDD ABCC_MRP_domain1 629 829 - -
Bva04g01614 1484 Gene3D - 1222 1473 IPR027417 -
Bva04g01614 1484 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 314 594 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g01614 1484 SMART AAA_5 656 829 IPR003593 -
Bva04g01614 1484 SMART AAA_5 1264 1456 IPR003593 -
Bva04g01614 1484 Pfam ABC transporter 647 781 IPR003439 GO:0005524
Bva04g01614 1484 CDD ABCC_MRP_domain2 1236 1456 - -
Bva04g01614 1484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 851 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01614 Bva-Chr4 17175088 17184266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01614 602 844 Calmodulin-binding Proteins AT2G36910 28.030 4.21e-20 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01614 K05666 - gmx:100811468 2333.52