Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01582 ATGAACTCGCACAAAAGAGTCAAAAAGTGTTTGAGTGTTGCATTTGTTGTGAACTTTGAAGCACTAGAGTTGTACATTTATGAAGAGAGCTTCAAAGTTCCCAGCATTTGGGTTGGTGGTACTCTGGTCTTTGCTAAATCAATGGTCATATGCCGGGATTATGACATTGACTTTGATGAGTATATCATCCACATCTTCTCCCGTCCTCACAAGGAAGTTTCTCCTGACAATGAGTTTGAGAAGCACATAAGATCAGAGGTTATCCCTGCAAATGAGATTGGGGTTACATTTGCAGATATTGGTGCAATGGATGAAATAAAGGAATCACTTCAAGAACTGGTGATGCTTCCTCTTAGAAGACCGGACCTCTTCAAAGGTGGCCTTCTGAAGCCTTGCAGAGGCATATTGCTTTTTGGGCCTCCGGGTACCGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATTAATGTCTCAATGTCAACCATCACTTCAAAATGGTTTggagaagatgaaaagaatGTCCGAGCTCTGTTCACACTTGCTGCAAAGGTTGCCCcaactattatttttgttgatgagGTTGACAGCATGCTTGGTCAGCGTTCTAGAGCTGGAGAACATGAGGCCATGAGGAAGATCAAAAATGAATTCATGTCCCATTGGGATGGTCTGATGACAAAGGCTGGTGAGCAAATTCTAGTTCTTGCTGCAACTAATAGGCCATTTGACCTTGACGAAGCAATTATTAGACGGTTTGAGCGCAGAATCATGGTTGGTCTTCCATCTGTTGAGAACAGGGAAATGATCCTCAAAACTCTCCTAGCTAAGGAAAAGGTTGATGAAAATATGGACTTTAAAGAGCTTGCTGTCATGACAGAAGGATATACTGGAAGCGATCTTAAGAATTTGTGTACAACCGCAGCTTATCGACCTCTTAGGGAGCTAATACAGCAAGAGAGAACGAAGGAGATGgaaaagaagaagaaagagacagAAGGACAAAGCACAGAAGCTGCTTCTGATGTTAAAGATAAAGAGGAACAAGTAATTACCCTGAGAAATCTAAACATGGAAGACATGAGACAAGCTAAGAGTCAGGTTTCTGCGAGCTTTGTCTCAGAAGGATCGATAATGACAGAGCTGAAACAGTGGAATGATCTGTATGGAGAAGGGGGTTCAAGGAAGAAGCAGCAGCTTACATACTTCTTATA 1229 0.4036 MNSHKRVKKCLSVAFVVNFEALELYIYEESFKVPSIWVGGTLVFAKSMVICRDYDIDFDEYIIHIFSRPHKEVSPDNEFEKHIRSEVIPANEIGVTFADIGAMDEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRSRAGEHEAMRKIKNEFMSHWDGLMTKAGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLAKEKVDENMDFKELAVMTEGYTGSDLKNLCTTAAYRPLRELIQQERTKEMEKKKKETEGQSTEAASDVKDKEEQVITLRNLNMEDMRQAKSQVSASFVSEGSIMTELKQWNDLYGEGGSRKKQQLTYFL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01582 409 Gene3D - 267 348 - -
Bva04g01582 409 ProSitePatterns AAA-protein family signature. 238 257 IPR003960 GO:0005524|GO:0016887
Bva04g01582 409 CDD AAA 101 266 - -
Bva04g01582 409 Pfam ATPase family associated with various cellular activities (AAA) 135 265 IPR003959 GO:0005524|GO:0016887
Bva04g01582 409 Pfam AAA+ lid domain 289 331 IPR041569 -
Bva04g01582 409 Gene3D - 94 266 IPR027417 -
Bva04g01582 409 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 60 409 - -
Bva04g01582 409 MobiDBLite consensus disorder prediction 327 351 - -
Bva04g01582 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 332 IPR027417 -
Bva04g01582 409 Coils Coil 318 338 - -
Bva04g01582 409 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 60 409 - -
Bva04g01582 409 SMART AAA_5 131 268 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01582 Bva-Chr4 16539948 16546881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01582 129 327 Calmodulin-binding Proteins AT3G56690 35.149 1.28e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01582 - - gmx:100804099 585.874