Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01561 ATGGTAGCAGCTACACTTAGGCGAATTGTGGCATCGTGTTGGAGACCATGTAATGTGGATGATGGCGAAAATTCCAGTAAGAATGGGGATGCAAATGGGACAACTGATGGTTTACTTTGGTACAAAGATACCGGAAAACACATCGCAGGCGAGTTCTCCATGGCGGTTATTCAGGCAAACAATTTGTTGGAAGATCAAAGCCAACTTGAATCAGGGCCCATGAGCTCTCTTGAGACAGGACCTCAAGGAACATTTGTAGGGATATATGATGGACATGGAGGTCCAGATGCTGCACGTTTTGTCAACCATAACCTATTTAACAATATCAAGAAATTCACTTCAGAGAATCAAGCAATGTCAGCTGATGTTATCAAGAAAGCATTTCTGGCAACAGAGgatgaatttctttctctagtAAGGAAGCAGTGGTTGAACAAGCCACAGTTGGCTTCTGTTGGATCATGCTGCTTAATAGGCTTAATATGTAGTGGGTTGCTCTATATTGCTAATGCTGGAGATTCTCGAGCAGTGTTAGGTAAAATGGAAGGGACTTCTAAACAAGTTAAAGCGGTTCAATTATCTTCTGAGCACAATGCTAGCTTCGAATCGGTGAGAGACGAGTTGCAGTTACTGCATCCTAATGATCCCCAGATTGTAGTGATGAAACACAAGGTCTGGCGTGTGAAGGGTCTGATTCAGGTTTCAAGATCCATTGGAGATGCCTACCTGAAGAAGGCAGAATTCAACAAAGAGCCTCTTTTGCCAAAATTTAGACTCCCAGAAACCTTTGAGAAGCCAATCCTTCTTGCTGAACCAACAATATCAGTACACAAACTTTGCCCTGAAGATCAGTTTCTTGTATTTGCATCAGACGGCTTATGGGAGCACTTGAGCAACCAAGAAGTAGTTGACATGGTCCAGAACTATGCCCATTATGGAATTGCAAGGAAGCTCATCAAAGCAGCACTGTGTGAAGCagcaaagaagagagaaatgagaTACTCAGACTTGAAAAAGATAGACCGAGGTGTGAGGAGACATTTCCACGATGACATATCTGTTATAGTTTTGTTTCTTGATTCTCATATAATCAGCCGCAGCAGTTCTCGTGGGCCATTACTCTCTGTCAAAGGAGGTTCTTCTCCTATTGCTATTGGAGATTG 1163 0.4153 MVAATLRRIVASCWRPCNVDDGENSSKNGDANGTTDGLLWYKDTGKHIAGEFSMAVIQANNLLEDQSQLESGPMSSLETGPQGTFVGIYDGHGGPDAARFVNHNLFNNIKKFTSENQAMSADVIKKAFLATEDEFLSLVRKQWLNKPQLASVGSCCLIGLICSGLLYIANAGDSRAVLGKMEGTSKQVKAVQLSSEHNASFESVRDELQLLHPNDPQIVVMKHKVWRVKGLIQVSRSIGDAYLKKAEFNKEPLLPKFRLPETFEKPILLAEPTISVHKLCPEDQFLVFASDGLWEHLSNQEVVDMVQNYAHYGIARKLIKAALCEAAKKREMRYSDLKKIDRGVRRHFHDDISVIVLFLDSHIISRSSSRGPLLSVKGGSSPIAIGD 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01561 387 SMART PP2C_4 41 357 IPR001932 -
Bva04g01561 387 Gene3D - 40 370 IPR036457 -
Bva04g01561 387 Pfam Protein phosphatase 2C 74 325 IPR001932 -
Bva04g01561 387 PANTHER PROTEIN PHOSPHATASE 2C 38-RELATED 8 381 - -
Bva04g01561 387 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Bva04g01561 387 CDD PP2Cc 52 359 IPR001932 -
Bva04g01561 387 PANTHER ALPHABET, ISOFORM E-RELATED 8 381 - -
Bva04g01561 387 SUPERFAMILY PP2C-like 80 360 IPR036457 -
Bva04g01561 387 ProSiteProfiles PPM-type phosphatase domain profile. 48 359 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01561 Bva-Chr4 16305506 16309640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01561 3 379 PP2C-type Phosphatase Gene Family AT3G12620 75.862 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01561 K01102 - mnt:21400255 596.275