Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01538 ATGCATCATGGCTGCTCACCTATACTTCACCGAGATATTTCGAGCAAGAACATTCTGTTCAATTTGGAATGCAAAGCTCACATTTCTGATTTTGGAACAGCTAAGTTTCTCAAACCATCCTCAAGCAATTGGACTTCATTTGCTGGCACTTTTGGCTATGTTGCTCCagAGTTTGCTTACACTATGAAAATAAACGAGAAATGTGATGTTTATAGATTTGGAGTATTAACTCTTGAAATAATTATGGGGCAGCATCCGGGAGATCTCATCACCTCTTTGTCATCAACCTCTTCAGCAGCATATAATTCCCCATTGAAGGATGTGTTGGACCAACGGCTTCCTCATCCTTCGAACTCAGATGCTGAAAAGGTGATACTAATTGCAAGGATTGCATTTGCTTGCTTGAGCGAAAGTCCTAGTTCTCGCCCAACCATGGAACAAGTATCCAAGGCAATCGTCATGCCAAAGACTCTTCCAATGGACCAATTCCACATTATCACACTTGGACAACTCCTGAAAGATTG 524 0.4141 MHHGCSPILHRDISSKNILFNLECKAHISDFGTAKFLKPSSSNWTSFAGTFGYVAPEFAYTMKINEKCDVYRFGVLTLEIIMGQHPGDLITSLSSTSSAAYNSPLKDVLDQRLPHPSNSDAEKVILIARIAFACLSESPSSRPTMEQVSKAIVMPKTLPMDQFHIITLGQLLKD 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01538 174 ProSitePatterns Tyrosine protein kinases specific active-site signature. 8 20 IPR008266 GO:0004672|GO:0006468
Bva04g01538 174 SUPERFAMILY Protein kinase-like (PK-like) 2 151 IPR011009 -
Bva04g01538 174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 172 - -
Bva04g01538 174 Gene3D Transferase(Phosphotransferase) domain 1 1 160 - -
Bva04g01538 174 Pfam Protein kinase domain 6 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01538 174 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01538 174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01538 Bva-Chr4 15710329 15710943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01538 1 159 Receptor kinase-like Gene Family AT5G65700 39.645 5.54e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01538 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01538 - - csin:114270995 220.32