Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01534 ATGATGTCCATGTTCAATTCTTATCCAACACCAATTTGGTGGGCTCTcaccattttattatttgccCATGCACTAGTTTTTTCTTCATCCAACTTTTTTGGTTCTTCCATCACTGCATCTTTAGCTTTGGCTGCTGCTGATGGCACACTTAATGATGAAGCAAATGCTCTCTTACGATGGAAAGCCAGCTATGACAACCAAAGCCAAGCTCTCCTTTCTTCATGGTCAGGTAACAGTCCTTGCAACTGGCAAGGAATCACATGTGACCTCACTAAATCAGTCTCACACATAGATTTAAGCAGTCTTGGACTGAGAGGTCCACTTCACACTCTCAACTTCTCCTCTTTGCCCAACCTCATCAGTTTTCACATATTCAACAACTCCTTCCATGGTACTATTCCCCGTCAAGTTGGAAAAATGTCCAGAATGTCTTCATTTCAGgttcatataaataatctgTCTGGAGTCTTTCCATCTGAGATACTACAACTGCCTATGCTTTATGAACTGGACTTGGGTGCCAATTCTTTTAGTGGAACCTTTCCTCAAGAAATAGGAACATTAAAATCCCTAAGTTATTTCAGCATATATGCGTGCAATTTCACAGGCTCTCTTCCTATTTCCATTGGAAAATTGACCAACTTGTCATATTTGAATCTGGGAGAAAACCAACTTTCTGGCCCCATACCTAAGGAAATTGGGAAATTATCCAAACTTACCTATCTACTTCTTCTTTCCAACAAATTTTTTGGGGGAATCCCTTCTACTATAGGTAACTTGCTCAGTTTACAGATTATTTACCTTCAAAACAACAATCTGTCTGGCCAGATTCTTAAGGAAATTTGGAAGTTAAGCAACCTAACTAGACTAATTCTCCATTCCAACAATTTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTCATTGAACTTGATTTGTCAACAAACTATTTCTCTGGTAGAATCCCTTCTACTATAGGAAAGTTGAGCAAATTACAGTTTTTATACCTTTGTGACAACAACCTATCTGGTTCCATTCCTAATGAAGTAGGAAATCTCAATTCTCTCATTCGATTTCAGTTGTTGGCAAATAAACTTTCCGGTGCAATCCCGCCAACCATAggaaatttgataagtttgagTAGCCTTCTTCTTAGGTCAAATGAGCTCTCGGGACCAATCCCAGCTTCCATTGGAAAATTGGTCAATTTGAAAACACTTGATTTTACTTTAAACAAACTTATAGGACCAATCCCAACTTCTTTTGGAAATTTGACAAAGCTCAGGGCATTAATTTTGCTTCAAAATAACTTAAGTGGAAGAATTCCCCCAGAAGTGAATAATCTCACTAATTTGGTGAGCTTGCGATTAggttataataatttcattggcCATTTGCCACAACAGATATGCCTTGGCGGGTTATTGACTCACTTCAGTGCTAACAACAACCATTTCACTGGCCCATTTCCTAGAAGCTTGAAGAATTGCTCTAGCATTTATAGACTCAGGGTTGACACTAATCAACTGACAGGAGACATGGCACAAGATTTTGGTGTATATCCAAATTTGAACTTTATTGATTTGAgtgacaacaaattttatggcCAACTTGCATCAAACTGGGGCAAATGCCATAACCTTACCAGCCTCGAGATCTTCAACAACAGATTGTCAGGTGGCATACCACCTGAACTTGCCGAGGCAGCCAACTTGCGAAGACTTAATCTCTCTTCAAATCATTTGACTGGGGCGATTCCCAAAGAACTGGGAAAGTTGTCATCACTGGTTCAACTCTCATTCAGCAACAACATGCTTTCAGGCAACATTCCAACTGAAATTGGAATGTTAGGGAAACTTGAACGGTTGGACTTGTCAGGAAACAAGTTAACCGGTTCAATTCCACAAGTTGTTGGTAACTTGCTCGAGCTATGGAGCTTGAATTTGAGCCAAAATAGATTTGACAAAAGCATCCCCTTTGACATAGGCGACTTACAAAAACTTCAATATCTTGATGTTAGTGGGAATTTGTTGACAGGAACAATACCAACATCTCTTGGCAACCTGCAAAAACTGGAAATCTTGAACCTCTCTCATAACAAGCTTTCTGGAAACATCCCATCCAGTTTTGATGATATGTCTAGCTTAACCTTTGTTGACATAGCTGACAATCAATTATGGGGTCCACTCCCTAATAATCCAGCCTTCCATAGTGCACCGATCGAGGCATTGAAAGACAATCAAGGGTTGTGTGGTAATGTCTCTGGCCTGGCAGTTTGCCCAACATCGATTTCTAATTCTCATGGTCAacacagaaagaaaattgtgcTACTGGTCTTGTTCCTCACACTAGGCACTCTATTGCTAGTGTTAGTTGTAGCtttgttttcatataaattttgtcaaagagaaagaggaatgGGAAACCAAGATGCAGAAGTAGAATGTCAAAATCCTTTTGCAGTGTGGAGTTACGATGGAAAAATAGTGTTCGAGAACATTATTGAAGCCACAGAGGATTTTGACAACAAATACCTCATCGGGGCAGGAGGGCAAGGAATTGTTTACAAAGCTGTGCTGTCCACCGGTCAAGTTGTTGCTGTGAAGAAACTTCACTCTGTTACAGATGGAGAAATGTCCAATCTAAAAGCATATAAAACTGAGGTTCAAGCCTTAACAGAAATCAGGCACCGTAACATTGTGAAGTTATGTGGCTTTTGCTCACATTCACAATAttcatttttggtttatgAGTTCTTGGAAGGAGGCAGCTTGGATAAGATACTAAAAGAAGAGACAAAAGCAATTGAGTTTGATTGGAAAAGAAGGTTGAATGTCGTTGAAGGTGTCGCTAGTGCTTTATCATATATGCATCATGGCTGCTCACCTCCTATAATTCATAGAGATATTTCAAGCAAGAACATTCTGTTCAATTTGGAATGCCAAGCTCACATTTCTGATTTTGGAACAGCTAAGTTTCTCAAACCATCCTCAAGCAATTA 3011 0.3773 MAQDFGVYPNLNFIDLSDNKFYGQLASNWGKCHNLTSLEIFNNRLSGGIPPELAEAANLRRLNLSSNHLTGAIPKELGKLSSLVQLSFSNNMLSGNIPTEIGMLGKLERLDLSGNKLTGSIPQVVGNLLELWSLNLSQNRFDKSIPFDIGDLQKLQYLDVSGNLLTGTIPTSLGNLQKLEILNLSHNKLSGNIPSSFDDMSSLTFVDIADNQLWGPLPNNPAFHSAPIEALKDNQGLCGNVSGLAVCPTSISNSHGQHRKKIVLLVLFLTLGTLLLVLVVALFSYKFCQRERGMGNQDAEVECQNPFAVWSYDGKIVFENIIEATEDFDNKYLIGAGGQGIVYKAVLSTGQVVAVKKLHSVTDGEMSNLKAYKTEVQALTEIRHRNIVKLCGFCSHSQYSFLVYEFLEGGSLDKILKEETKAIEFDWKRRLNVVEGVASALSYMHHGCSPPIIHRDISSKNILFNLECQAHISDFGTAKFLKPSSSN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01534 487 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 487 - -
Bva04g01534 487 Gene3D Phosphorylase Kinase; domain 1 293 406 - -
Bva04g01534 487 SMART LRR_typ_2 176 199 IPR003591 -
Bva04g01534 487 SMART LRR_typ_2 57 80 IPR003591 -
Bva04g01534 487 SMART LRR_typ_2 128 152 IPR003591 -
Bva04g01534 487 SMART LRR_typ_2 104 127 IPR003591 -
Bva04g01534 487 ProSitePatterns Tyrosine protein kinases specific active-site signature. 452 464 IPR008266 GO:0004672|GO:0006468
Bva04g01534 487 SUPERFAMILY Protein kinase-like (PK-like) 311 485 IPR011009 -
Bva04g01534 487 PRINTS Leucine-rich repeat signature 176 189 - -
Bva04g01534 487 PRINTS Leucine-rich repeat signature 107 120 - -
Bva04g01534 487 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 487 - -
Bva04g01534 487 SUPERFAMILY L domain-like 4 239 - -
Bva04g01534 487 ProSiteProfiles Protein kinase domain profile. 328 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01534 487 Gene3D Ribonuclease Inhibitor 1 255 IPR032675 -
Bva04g01534 487 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Bva04g01534 487 Gene3D Transferase(Phosphotransferase) domain 1 407 487 - -
Bva04g01534 487 Pfam Protein kinase domain 330 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01534 487 Pfam Leucine Rich Repeat 106 125 IPR001611 GO:0005515
Bva04g01534 487 Pfam Leucine Rich Repeat 58 80 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01534 Bva-Chr4 15647016 15657019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01534 1 487 Receptor kinase-like Gene Family AT4G08850 46.341 1.75e-146 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01534 Pkinase 3.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01534 - - gmx:100815688 583.178