Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01532 ATGTATTGCAACTTTAAGGAGAATGCTGCTGAGTACATTAAGCAAGCAGTTCATGAAGATGATGCAGGAAACTATAGAAAGGCTTTGACCCTTTATATGAGTGCATTAGAATACTTAAAGGTCCATTTGAAGTATGAAAAGAACCCCAAGATTAAGGAAACTGTAACTGAGAAATTTATTGACTACTTGAGGAGGGCAGAGGAGATACGTGCCATTCTTGATACAGGAGGGAGTGGAACTAACTTGAATAATGAAGCAGCCGATGCTGTAAGAGTGGAGATGAGAGAGACTAGGAGGATCCAGAGAAAGCAAAGCTCAAGGCTGGCCTTACAAGAAGCTGTCATATTGCCAGTTAAATTCCCACAATTTTTGACTGGGAAGAGGAAACCATGCAGAGCATTTCTGTTATATGGCCCACCTGGAACAGGGAAGTCATATTTAGCAAAGGCTGTAGCAACCGAAGTAGACTCTACATTTTTCAGCGTTTCATCATCTGATCTTGTTTCGAAATGGATGGGTGAAAGTGAAAAGCTGGTATCCAGTCTTTTCCAAATGGCTCGCGAGAGTGCtccatcaataatttttattgatgaaatagATTCTCTATGTGGTCAACGAGGTGAAGGCAATGAAAGTGAAGCATCTAGACGCATCAAAACAGAACTTCTTGTACAAATGCAGGTGTTAGAAAAGAAGATCAGAAAGTTCTTATTCTTGCAGCAACCAATACTCCTTATGCTCTGGATAAGGCCATCCGAAGACGATTTGACAAACGAATATACATCCCTCTTCCAGACCAAAAGGCAAGGCAGCACATGTTTAAGGTGCATCTTGGAGATACTCCTCATAATTTA 854 0.4005 MYCNFKENAAEYIKQAVHEDDAGNYRKALTLYMSALEYLKVHLKYEKNPKIKETVTEKFIDYLRRAEEIRAILDTGGSGTNLNNEAADAVRVEMRETRRIQRKQSSRLALQEAVILPVKFPQFLTGKRKPCRAFLLYGPPGTGKSYLAKAVATEVDSTFFSVSSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQVLEKKIRKFLFLQQPILLMLWIRPSEDDLTNEYTSLFQTKRQGSTCLRCILEILLII 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01532 284 SMART AAA_5 130 253 IPR003593 -
Bva04g01532 284 CDD AAA 132 236 - -
Bva04g01532 284 Pfam ATPase family associated with various cellular activities (AAA) 135 239 IPR003959 GO:0005524|GO:0016887
Bva04g01532 284 PANTHER PROTEIN SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 1 96 - -
Bva04g01532 284 PANTHER PROTEIN SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 104 239 - -
Bva04g01532 284 Gene3D - 107 236 IPR027417 -
Bva04g01532 284 Gene3D - 6 75 - -
Bva04g01532 284 PANTHER AAA DOMAIN-CONTAINING 1 96 - -
Bva04g01532 284 PANTHER AAA DOMAIN-CONTAINING 104 239 - -
Bva04g01532 284 SUPERFAMILY MIT domain 4 79 IPR036181 -
Bva04g01532 284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 227 IPR027417 -
Bva04g01532 284 SMART smart 2 79 IPR007330 -
Bva04g01532 284 Pfam MIT (microtubule interacting and transport) domain 8 70 IPR007330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01532 Bva-Chr4 15641735 15646494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01532 110 233 Calmodulin-binding Proteins AT3G56690 45.669 1.84e-25 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01532 K12196 - egr:104421293 332.798