Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01516 ATGATGTCCATGTTCAATTCTTATCCAACACCAATTTGGTGGGCTCTcaccattttattatttgccCATGCACTAGTTTTTTCTTCATCCAACTTTTTTGGTTCTTCCATCACTGCATCTGTAGCTTTGGCTGCTGCTGATGGCACACTTAATGATGAAGCAAATGCTCTCTTACGATGGAAAGCCAGCTATGACAACCAAAGCCAAGCTCTCCTTTCTTCATGGTCAGGTAACAGTCCTTGCAGCTGGCAAGGAATCACATGTGACCTCACTAAATCAGTCTCACACATAGATTTAAGCAGTCTTGGACTGAGAGGTCCACTTCACACTCTCAACTTCTCCTCTTTGCCCAACCTCATCAGTTTTCACATATTCAACAACTCCTTCCATGGTACTATTCCCCGTCAAGTTGGAAAAATGTCCAGAATGTCTTCATTTCAGgttcatataaataatctgTCTGGAGTCTTTCCATCTGAGATACTACAACTGCCTATGCGTTATGAACTGGACTTGGGTGCCAATTCTTTTAGTGGAACCTTTCCTCAAGAAATAGGAACATTAAAATCCCTAAGTTATTTCAGCATATATGCGTGCAATTTCACAGGCTCTCTTCCTATTTCCATAGGAAAATTGACCAACTTGTCATATTTGAATCTGGGGGAAAACCAACTTTCTGGCCCCATACCTAAGGAAATTGGGAAATTATCCAAACTTACCTATCTACTTCTTCTTTCCAACAACTTTTTTGGGGGAATCCCTTCTACTATAGGTAACTTGCTCAGTTTACTGATTAGTCACCTTCAAAACAACAATCTGTCTGGCCAGATTCTTAAGGAAATGTGGAAGTTAAGCAACCTAACTAGACTAATTCTCCATTCCAACAATTTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTCATTGAACTTGATTTGTCAACAAACTATTTCTCTGGTAGAATCCCTTCTACTATAGGAAAGTTGAGCAAATTACAGTTTTTATACCTTTGTGACAACAACCTCTCTGGTTCCATTCCTAATGAAGTAGGAAATCTCAATTCTCTCATTCGATTTCAGTTGTTGGCAAATAAACTTTCCGGTGCAATCCCGCCAACCATAggaaatttgataagtttgagTAGCCTTCTTCTTAGGTCAAATGAGCTCTTGGGACCAATCCCAGCTTCCATTGGAAAATTGGTCAATTTGAAAACACTTGATTTTGCTTTAAACAAACTTATAGGACCAATCCCAACTTCTTTTGGAAATTTGACAAAGCTCAGGGCATTAATTTTGGTTCAAAATAACTTAAGTGGAAGAATTCCCCCAGAAGTGAATAATCTCACTAATTTGGTGAGCTTGCGATTAggttataataatttcattggcCATTTGCCACAACATATATGCCTTGGTGGGTTATTGACTCACTTCAGTGCTAACAACAACCATTTCACTGGCCAATTTCCTAGAAGCTTGAAGAATTGCTCTAGCATTTATAGACTCGGGGTTGACACTAATCAACTGACAGGAGACATGGCACAAGATTTTTGCCTCGAGATCTTCAACAACAGATTGTCAGGTGGCATACCACCTGAACTTGCCGAGGCAGCCAACTTGCGAAGACTTAATCTCTCTTCAAATCATTTGACTGGGGAGATTCCCAAAGAACTGGGAAAGTTGTCATCACTGGTTCAACTCTCATTCAGCAACAACACGCTTTCAGGCAACATTCCAACTGAAATTGGAATGTTAGGGAAACTTGAACGGTTGGACTTGTCAGGAAACAAGTTAAATGGTTCAATTCCTCAAGTTGTTGGTAACTTGCTCGAGCTATGGAGCTTGAATTTGAGCCAAAATAGATTTGACAAAAGCATCCCCTTTGACATAGGCGACTTACAAAAACTTCAATATCTTGATGTTAGTGGGAATTTGTTGACAGGAACAATACCAACATCTCTTGGCAACCTGCAAAAACTGGAAATCTTGAACCTCTCTCATAATAAGCTTTCTGGAAACATCCCATCCAGTTTTGATGATATGTCTAGCTTAACCTTTGTTGACATAGCTGACAATCAATTATGGGGTCCACTCCCTAATAATCCAGCCTTCCATAGTGCACTGATCGAGGCATTGAAAGGCAATCAAGGGTTGTGTGGTAATGTCTCTGGCCTGGCAGTTTGCCCAACATCGAGTTCTAATTCTCATGATCaacatagaaagaaaattgtgcTACTGGTCTTGTTCCTCACACTAGGCACTCTATTGCTAGTTAttcatttttggtttatgAGTTCTTGGAAAAGAAGGTTGAATGTCGTTGAAGGTGTCGCTAGTGCTTTATCATATATGCATCATGGCTGCTCACCTATAATTCATCGAGATATTTCAAGCAAGAACATTCTGTTCGATTTGGAATGCCAAGCTCACATTTCTGATTTTGGAACAGCTAAGTTTCTCAAACCATCCTCAAGCAATTGGACTTCATTTGCTGGCACTTTTGGCTATGCTGCTCcagAGTTTGCTTACACTATGGAGGTGAACGAGAAATGtaatgtttatagttttggagtaTTAGCTCTTGAAATAATTATGGGACAGCATCCAGGAGATCTCATCACCTCTTTGTCATCAACCTCATCAGCAGCATATAATTCCCTATTGAAGGATGTGTTGGACCAACGGCTTCCTCATCCTTTCAACTCAGATGCTGAAAAGGTGATCCTAATTGTAAGGATTGCATTTGCTTGCTTGAGTGAAAGTCCTAGTTCTCGCCCAACCATGGAACAAGTATCTAAGGCAATCGTCATGCCAAAGACTCTTCCATTGGACCAATTCCACATTATCACACTTGGAGAACTCCTGAAAGATTG 2885 0.3872 MMSMFNSYPTPIWWALTILLFAHALVFSSSNFFGSSITASVALAAADGTLNDEANALLRWKASYDNQSQALLSSWSGNSPCSWQGITCDLTKSVSHIDLSSLGLRGPLHTLNFSSLPNLISFHIFNNSFHGTIPRQVGKMSRMSSFQVHINNLSGVFPSEILQLPMRYELDLGANSFSGTFPQEIGTLKSLSYFSIYACNFTGSLPISIGKLTNLSYLNLGENQLSGPIPKEIGKLSKLTYLLLLSNNFFGGIPSTIGNLLSLLISHLQNNNLSGQILKEMWKLSNLTRLILHSNNFSGSIPEEIGTLTNLIELDLSTNYFSGRIPSTIGKLSKLQFLYLCDNNLSGSIPNEVGNLNSLIRFQLLANKLSGAIPPTIGNLISLSSLLLRSNELLGPIPASIGKLVNLKTLDFALNKLIGPIPTSFGNLTKLRALILVQNNLSGRIPPEVNNLTNLVSLRLGYNNFIGHLPQHICLGGLLTHFSANNNHFTGQFPRSLKNCSSIYRLGVDTNQLTGDMAQDFCLEIFNNRLSGGIPPELAEAANLRRLNLSSNHLTGEIPKELGKLSSLVQLSFSNNTLSGNIPTEIGMLGKLERLDLSGNKLNGSIPQVVGNLLELWSLNLSQNRFDKSIPFDIGDLQKLQYLDVSGNLLTGTIPTSLGNLQKLEILNLSHNKLSGNIPSSFDDMSSLTFVDIADNQLWGPLPNNPAFHSALIEALKGNQGLCGNVSGLAVCPTSSSNSHDQHRKKIVLLVLFLTLGTLLLVIHFWFMSSWKRRLNVVEGVASALSYMHHGCSPIIHRDISSKNILFDLECQAHISDFGTAKFLKPSSSNWTSFAGTFGYAAPEFAYTMEVNEKCNVYSFGVLALEIIMGQHPGDLITSLSSTSSAAYNSLLKDVLDQRLPHPFNSDAEKVILIVRIAFACLSESPSSRPTMEQVSKAIVMPKTLPLDQFHIITLGELLKD 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01516 961 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Bva04g01516 961 SUPERFAMILY L domain-like 523 724 - -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 522 605 IPR032675 -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 606 732 IPR032675 -
Bva04g01516 961 SUPERFAMILY L domain-like 245 515 - -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 329 420 IPR032675 -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 421 521 IPR032675 -
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 770 943 - -
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 189 - -
Bva04g01516 961 SMART LRR_typ_2 661 684 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 212 236 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 637 660 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 542 565 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 332 356 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 589 613 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 452 476 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 284 308 IPR003591 -
Bva04g01516 961 SMART LRR_typ_2 428 451 IPR003591 -
Bva04g01516 961 Pfam Leucine rich repeat 639 698 IPR001611 GO:0005515
Bva04g01516 961 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Bva04g01516 961 Pfam Leucine rich repeat 285 345 IPR001611 GO:0005515
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 199 262 IPR032675 -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 263 328 IPR032675 -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 41 189 - -
Bva04g01516 961 SUPERFAMILY L domain-like 50 275 - -
Bva04g01516 961 SMART LRR_sd22_2 589 615 - -
Bva04g01516 961 SMART LRR_sd22_2 404 430 - -
Bva04g01516 961 SMART LRR_sd22_2 637 663 - -
Bva04g01516 961 SMART LRR_sd22_2 212 238 - -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 227 350 - -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 148 305 - -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 316 521 - -
Bva04g01516 961 Gene3D Ribonuclease Inhibitor 49 198 IPR032675 -
Bva04g01516 961 ProSiteProfiles Leucine-rich repeat profile. 543 566 IPR001611 GO:0005515
Bva04g01516 961 Pfam Leucine rich repeat N-terminal domain 51 89 IPR013210 -
Bva04g01516 961 Pfam Protein kinase domain 774 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 148 305 - -
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 316 521 - -
Bva04g01516 961 ProSiteProfiles Protein kinase domain profile. 640 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01516 961 Gene3D Transferase(Phosphotransferase) domain 1 765 944 - -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 523 765 - -
Bva04g01516 961 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 770 943 - -
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 523 765 - -
Bva04g01516 961 PRINTS Leucine-rich repeat signature 661 674 - -
Bva04g01516 961 PRINTS Leucine-rich repeat signature 592 605 - -
Bva04g01516 961 SUPERFAMILY Protein kinase-like (PK-like) 745 942 IPR011009 -
Bva04g01516 961 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 227 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01516 Bva-Chr4 15442793 15446261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01516 743 843 Receptor kinase-like Gene Family AT4G08850 53.333 1.66e-25 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01516 Pkinase 3.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01516 - - gmx:100808316 638.262