Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01509 ATGGAAATTAGGAAGCTAACCAACCTAACTATTCTAATTCTCTATTCCAACAATCTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTTATTGAACTTGATATGTCAACAAACCATTTCTCTAGTAGAATCCCTTCTACTATAGGTAACTTGTTCAGTTTACAGGTTCTTTCCCTTCATAACAACGATCTATCAGGCCAGATTCCTATGGAAATTAGGAAGTTAAGCAACCTAATTAGACTAATTCTCAATTCCAACAATTTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTAACAAACCTCTTTGAACTTGATTTCTCAACAAACTATTTCTCTGGTAGAATCCCTTCTACCATAGGAAAGTTGAGCAAATTACAGTTTTTATACCTCTATGTCAACAACCTCTCTGGTTCCATTCCTAATGAAGTAGGAAACCTCCATTCTCTCATTCATCTTCAATTGTTGGGAAATAAACTTTCTGGTGCAATCCCGCCAACCATAggaaatttgataagtttgagTAGCCTTCTTCTTTGGTCAAATGAGCTCTCGGGACCAATCCCAGCTTCCATTGGAAAATTGGTCAGTTTGGAAAcactttcttttaatgaaaacAAACTTATAGGACCAATCCCAGATTCCATTGGAAAATTGGTCAATTTGGAAACACTTGATTTTAGTGAAAACAAACTTATAGGACCAATCCCAACTTCTTTTGGAAATTTGACAAAGCTCAGCACATTAAGTTTGCTTCAAAATAACTTCAGTGGAAGAATTCCCCCAGAAGTGAATAATCTCACTAATTTGGTGAGCTTGCAATTAggttataataatttcattggcCATTTGCCACAACAGATATGCCTTGGCGGGTTATTGACAAAATTCAGTGCTAACAACAACCATTTCACTGGCCCATTTCCTAGAAGCTTGAAGAATTGCTCTAGCATTTATAGAGTCAGGGTTGACAATAATCAACTGACAGGAGACATGGCACAAGATTTTGGTGTATATCCAAATTTAGACTATATTGATTTGAgtgacaacaaattttatggcCAACTTGCATCAAACTGGGGCAAATGCCATAACCTTACCAGCCTCGAGATCTTCAACAACAGATTATCAGGTGGCATACCACCTGAACTTGCCGAGGCAGCCAACTTACGAAGACTTAATCTCTCTTCAAATCATTTGACTGGGGAGATTCCCAAAGAACTGGGAAAGTTGTCATCACTGGTTCAACTCTCATTCAGCAACAACACGCTTTCAGGCAACATTCCAACTGAAATTGGAATGTTAGGGAAACTTGAACGCTTGGACTTGTCAGCAAACAAGTTAAGCGGTTCAATTCCACAAGTTGTTGGTAACTTGCTCAAGTTATGGAGCTTGAATTTGAGCCAAAATAGATTTGACAAAAGCACCCCCTTTGAGATAGGCGACTTACAAAATCTTCAATATCTTGATGTTAGTGGGAATTTGTTGACAGGAACAATACCAACATCTCTTGGCAACCTGCAAAGACTGGAAATCTTGAACCTCTCTCATAACAAGCTTTCTGGAAACATCCCATCCAGTTTTGATGATATGTCTAGCTTAACCTTTGTTGACATAGCTGACAATCAATTATGGGGTCCACTCCCTAATAATCCAGCCTTCCATAGGGCACCGATTGAAGCATTGAAAGACAATAAAGGGTTGTGTGGTAATGTCTCTGGCCTGGCAGTTTGCCCAATATCGAGTTCTAATTCTCATGGTCAacacagaaagaaaattgtgcCACTGGTCTTGTTCCTCACACTAGGCACTCTATTGCTAGTGTTAGTTGTAGCTAcgttttcatataaattttgtcaaagagCAAGAGGAATCGGAAACCAAGATGCAGAAGCAAAATGTGAAAATCTTTTTGCAGTGTGGAGTTACGATGGAAAAATAGTGTTCGAGAACATTATTGAAGCCACAGAGGATTTTGACAACAAATACCTCATCGGGGCAGGAGGGCAAGGAATTGTTTACAAAGCTGTGCTGCCCACAGGTCAAGTTGTTGCTGTGAAGAAACTTCACTCTGTTACAAATGGAGAAATGTCCAATCTAAAAGCATTTAAAAATGAGGTTCAAGCCTTAACAGAAATCAGGCACCGTAACATTGTGAAGTTGTTTGGCTTTTGCTCACATTCACAATATTCACTTTTGGTTTATGAGTTCTTGGAAGGAGGCAGCTGGGATAAGATACTAAAAGAAGACACAAAAGCAATTGAATTTGATTGGAAAAGAAGGTTGAATGTCGTTGAAGGTGTCGCTAGTGCTTTATCATATATGCATCATGGCTGCTCACCTCCTATAATTCATCGAGATATTTCAAGCAAGAACATTCTGTTCAATTTGGAATGCGAAGCTCACATTTCTAATTTTGGAACAGCTAAGGTTCTCAAACCATCCTCAAGCAATTG 2465 0.3716 MEIRKLTNLTILILYSNNLSGSIPEEIGTLTNLIELDMSTNHFSSRIPSTIGNLFSLQVLSLHNNDLSGQIPMEIRKLSNLIRLILNSNNFSGSIPEEIGTLTNLFELDFSTNYFSGRIPSTIGKLSKLQFLYLYVNNLSGSIPNEVGNLHSLIHLQLLGNKLSGAIPPTIGNLISLSSLLLWSNELSGPIPASIGKLVSLETLSFNENKLIGPIPDSIGKLVNLETLDFSENKLIGPIPTSFGNLTKLSTLSLLQNNFSGRIPPEVNNLTNLVSLQLGYNNFIGHLPQQICLGGLLTKFSANNNHFTGPFPRSLKNCSSIYRVRVDNNQLTGDMAQDFGVYPNLDYIDLSDNKFYGQLASNWGKCHNLTSLEIFNNRLSGGIPPELAEAANLRRLNLSSNHLTGEIPKELGKLSSLVQLSFSNNTLSGNIPTEIGMLGKLERLDLSANKLSGSIPQVVGNLLKLWSLNLSQNRFDKSTPFEIGDLQNLQYLDVSGNLLTGTIPTSLGNLQRLEILNLSHNKLSGNIPSSFDDMSSLTFVDIADNQLWGPLPNNPAFHRAPIEALKDNKGLCGNVSGLAVCPISSSNSHGQHRKKIVPLVLFLTLGTLLLVLVVATFSYKFCQRARGIGNQDAEAKCENLFAVWSYDGKIVFENIIEATEDFDNKYLIGAGGQGIVYKAVLPTGQVVAVKKLHSVTNGEMSNLKAFKNEVQALTEIRHRNIVKLFGFCSHSQYSLLVYEFLEGGSWDKILKEDTKAIEFDWKRRLNVVEGVASALSYMHHGCSPPIIHRDISSKNILFNLECEAHISNFGTAKVLKPSSSN 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01509 821 Gene3D Ribonuclease Inhibitor 293 582 IPR032675 -
Bva04g01509 821 Gene3D Ribonuclease Inhibitor 125 292 IPR032675 -
Bva04g01509 821 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 84 189 - -
Bva04g01509 821 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 96 - -
Bva04g01509 821 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 136 821 - -
Bva04g01509 821 SUPERFAMILY Protein kinase-like (PK-like) 649 819 IPR011009 -
Bva04g01509 821 Gene3D Phosphorylase Kinase; domain 1 625 740 - -
Bva04g01509 821 ProSitePatterns Tyrosine protein kinases specific active-site signature. 786 798 IPR008266 GO:0004672|GO:0006468
Bva04g01509 821 Gene3D Ribonuclease Inhibitor 56 124 IPR032675 -
Bva04g01509 821 Gene3D Ribonuclease Inhibitor 1 55 IPR032675 -
Bva04g01509 821 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 136 821 - -
Bva04g01509 821 Gene3D Transferase(Phosphotransferase) domain 1 741 821 - -
Bva04g01509 821 PRINTS Leucine-rich repeat signature 510 523 - -
Bva04g01509 821 PRINTS Leucine-rich repeat signature 441 454 - -
Bva04g01509 821 SUPERFAMILY L domain-like 5 307 - -
Bva04g01509 821 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 96 - -
Bva04g01509 821 ProSiteProfiles Protein kinase domain profile. 662 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01509 821 Pfam Leucine Rich Repeat 392 414 IPR001611 GO:0005515
Bva04g01509 821 Pfam Leucine Rich Repeat 224 246 IPR001611 GO:0005515
Bva04g01509 821 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 84 189 - -
Bva04g01509 821 SMART LRR_sd22_2 486 512 - -
Bva04g01509 821 SMART LRR_sd22_2 198 217 - -
Bva04g01509 821 SMART LRR_sd22_2 6 29 - -
Bva04g01509 821 SMART LRR_sd22_2 222 248 - -
Bva04g01509 821 SMART LRR_sd22_2 438 464 - -
Bva04g01509 821 SUPERFAMILY RNI-like 234 549 - -
Bva04g01509 821 Pfam Leucine rich repeat 488 547 IPR001611 GO:0005515
Bva04g01509 821 SMART LRR_typ_2 486 509 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 174 198 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 510 533 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 270 294 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 126 150 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 6 28 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 222 245 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 391 414 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 78 102 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 30 54 IPR003591 -
Bva04g01509 821 SMART LRR_typ_2 438 462 IPR003591 -
Bva04g01509 821 Pfam Protein kinase domain 664 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01509 821 ProSiteProfiles Leucine-rich repeat profile. 392 415 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01509 Bva-Chr4 15393885 15396350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01509 6 821 Receptor kinase-like Gene Family AT4G08850 46.416 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01509 Pkinase 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01509 - - gmx:100793419 870.922