Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01508 ATGATGTCTATGTTCAATTCTCATCCAAGACCAATTTGGTGGGTTCTcaccattttattatttgccCATGCACTAGTTTTTTCTTCATCCAACTGTTTTGGTTCTTCCATCACTGCATCTTCTGCTTTGGCTGCTGCTGATGGCACACTTAATGATGAAGCAAATGCTCTCTTACGATGGAAAGCCTGCTATGACAACCAAAGCCAAGCTCTCCTTTCTTCATGGACAGGTAACAGTCCTTGCAACTGGCAAGGAATCACATGTGATCTCACTAAATCAGTCTCACACATAGATTTAAGCAGTCTTGGACTGAGAGGTCCACTTCACACTCTCAACTTCTCCTCTTTGCCCAACCTCATCAGTTTTCACATATTCAACAACTCCTTCCATGGTACTATTCCCCGTCAAGTTGGAAAAATGTCCAGAATGTCTTCATTTCAGgttcatataaataatctgTCTGGAGTCTTTCCATCTGAGATATTACAACTGCCTATGCTTTATGAACTGGACTTGGGTGCCAATTCTTTTAGTGGAACCTTTCCTCAAGAAATAGGAACGTTAAAATCCCTAAGTTATTTCAGCATATATAAGTGCAATTTCACAGGCTCTCTTCCTATTTCCATAGGAAAATTGACCAACTTGTCATATTTGAATCTGGGAGAAAACCAACTTTCTGGCCCCATACCTAAGGAAATTGGGAAATTATCCAAACTTACCGATCTACTTCTTCTTTCGAACAACTTTTTTGGGGGAATCCCTTCTACTATAGGTAACTTGTTCAGTTTACAGATTATTTACCTTCAAAACAGCAATCTCTCTGGCCAGATTCCTATGGAAATTTGGAAGTTAAGCAAcctaactaaattaattctcCATTCCAACAATTTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTCATTGAACTTGATTTGTCAACAAACTATTTATCTGGTAGAATCCCTTCTACTATAGGAAAGTTGAGCAAATTACAGTTTTTATACCTTTATGACAACAACCTCTCTGGTTCCATTCCTAATGAAGTAGGAAATCTCCATTCTCTCATTCATCTTCAATTGTTGGGAAATAAACTTTCTGGTGCAATCCCGCCAACCATAggaaatttgataagtttgagTAGCCTTCTTCTTTGGTCAAATGAGCTCTCGGGACCAATCCCAGCTTCCGTTGGAAAATTGGTCAGTTTGGAAAcactttcttttaatgaaaacGAACTCATAGGATCAATCCCGCCAAGCATTGGAAACTTGACAAAGCTCAATGTATTATCTTTGCTCAACAATAGCTTCAGTGGCATCATTCCCCCGGAAATGAATAATCTCACTAATTTGGTGAGTTTGCAATTAGGTGAGAATAATTTCATTGGCCATTTGCCACAACAGATATGCCTTGGCGGGTTATTGACAAAATTCAGTGCTAACAACAACCATTTCACTGGCCCATTTCCTAGAAGCTTGAAGAATTGCTCTAGCATTTATAGAGTCAGGGTTGACAATAATCAACTGACAGGAGACATGGCACAAGATTTTGGTGTATATCCAAATTTAGACTATATTGATTTGAgtgacaacaaattttatggcCAACTTGCATCAAACTGGGGCAAATGCCATAACCTTACCAGCCTCCAGATCTTCAACAACAGCTTGTCAGGTGGCATACCACCTGAAATTGCCGAGGCAGCCAACTTACAAAGACTTAATCTCTCTTCAAATCATTTGACTGGGGAGATTCCCAAAGAACTGGGAAAGTTGTCATCACTGCTTGAACTCTCATTCAGCAACAACATGCTTTCAGGCAACATTCCAACTGAAATTGGAATGTTAGGGAAACTTGAACGCTTGGACTTGTCAGCAAACAAGTTAAGCGGTTCAATTCCACAAGTTGTTGGTAACTTGCTCAAATTATGGAGCTTGAATTTGAGCCAAAATAGATTTGATAAAAGCATCCCCTTTTTGATAGGCGACTTACAAAATCTTCAATATCTTGATGTTAGTGGGAATTTGTTGACAGGAACAATACCAACATCTCTTGGCAACCTGCAAAGATTGGAAACCTTGAACCTGTCTCATAACAAGCTTTCTGGAAACATCCCATCCAGTTTTGATGGTATGTCTAGCTTAACCTTTGTTGACATAGCTGACAATCAATTATGGGGTCCACTCCCTAATAATCCAGCCTTCCATAGTGCACCGATTGAAGCATTGAAAGACAATAAAGGGTTGTGTGGTAATATCTCTGGCCTGGCACTTTGCCCAACATGGAGTTCTAATTCTCATGGTCAacacagaaagaaaattgtgcCACTGGTCTTGTTCCTCACACTAGGCACTCTATTGCTAGTGTTAGTTGTAGCTAcgttttcatataaattttgtcaaagagCAAGAGGAATAGGAAACCAAGATGCAGAAGCAGAATGTCAAAATCTTTTTGCAGTGTGGAGTTATGATGGAAAAATAGTGTTCGAGAGCATTATTGAAGCCACAGAGGATTTTGACAACAAATACCTCATCGGGGCAGGAGGGCAAGGCATTGTTTACAAAGCTGTGCTGCCACAGGTCAAGTTGTTGCTGTG 2612 0.379 MSNLKAFKNEVQALTEIRHRNIVKLFGFCSHSQYSLLVYEFLEGGNLDKILKEETKAIEFDWKRRLNVVEGVTNALSYMHHGCSPPIIHRDISSKNILFNLECEAHISDFGTAKFLKPYSNNWTSFAGTFGYAAPEFAYTMEVNKKCDVYSFGVLALEIIMGQHPGDLITSMSSTSSTAYNSLLKDVLDQRLPHPSNSDAEKVILIARIAFACLRESPSSRPTMEQVSKAIVMPKILTLDQFHIITLGQLLKD 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01508 253 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01508 253 Gene3D Transferase(Phosphotransferase) domain 1 42 237 - -
Bva04g01508 253 PIRSF ILK 1 238 - -
Bva04g01508 253 Pfam Protein kinase domain 5 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01508 253 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 251 - -
Bva04g01508 253 ProSitePatterns Tyrosine protein kinases specific active-site signature. 87 99 IPR008266 GO:0004672|GO:0006468
Bva04g01508 253 SUPERFAMILY Protein kinase-like (PK-like) 4 230 IPR011009 -
Bva04g01508 253 Gene3D Phosphorylase Kinase; domain 1 1 41 - -
Bva04g01508 253 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01508 Bva-Chr4 15379084 15379972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01508 2 135 Receptor kinase-like Gene Family AT4G08850 61.194 1.66e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01508 Pkinase 3.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01508 - - gmx:100814634 344.739