Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01502 ATGTCCATGTTCAATTCTCATCCAACACCAATTTGGTGGGTTCTcaccattttattatttgccCATGCACTAGTTTTTTCTTCATCCAACTTTTTTGGTTCTTCCATCACTGCATCTTTTGCTTTGGCTGCTGCTGATGGCACACTTAATGATGAAGCAAATGCTCTCTTACGATGGAAAACCAGCTATGACAACCAAAGCCAAGCTTTCCTTTCTTCGTGGACAGGTAACAGTCCTTGCAACTGGCAAGGAATCACATGTGACCTCACTAAATCAGTCTCACACATAGATTTAAGCAGTCTTGGACTGAGAGGTCCACTTCACACTCTCAACTTCTCCTCTTTGTCCAACCTCATCAGTTTTCACATATTCAACAACTCCTTCTATGGTACTATTCCCCGTCAAGTTGGAAAAATGTCCAAAATGTCTTCATTTCAGgttcatataaataatctgTCTGGAGTCTTTCCATCTGAGATACTACAACTGCCTATGCTTTATGAACTGGACTTGGGTGCCAATTCTTTTAGTGGAACCTTTCCTCAAGAAATAGAAACATTAAAATCCCTAAGTTATTTCAGCACATATGCATGCAATTTCACAGGCTCTCTTCCCATTTCCATCGGAAAATTGACCAACTTGTCATATTTGAATGTAGGAAATAACCAACTTTCTGGCCCCATTCCTAtggaaatttggaaattaTCCAACCTTACCCaactaattcttttttccaacAACTTTTTTGGGGGAATCCCTTCTACTATACGTAACTTGTGCAGTTTACAGGTTATTTACCTTCAAAACAACAATCTCTCTGGCCAGATTCCTATGGAAATTAGGAAGCTAACCAACCTAACTATTCTAATTCTCTATTCCAACAATCTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTCATTGAACTTGATTTGTCAACAAACCATTTCTCTGGTAGAATCCCTTCTACTATAGGTAACTTGTTCAGTTTACAGGTTCTTTCCCTTCATAACAACGATCTCTCAGGCCAGATTCCTATGGAAATTAGGAAGTTAAGCAACCTAATTAGACTAATTCTCAATTCCAACAATTTTTCTGGTTCCATACCAGAAGAAATTGGAACCTTGACAAACCTCTTTGAACTTGATTTGTCAAGAAACTATTTCTCTGGTAGAATCCCTTCTACCATAGGAAAGTTGAGCAAATTACAGTTTTTATACCTCTATGTCAACAACCTCTCTGGTTCCATTCCTAATGAAGTAGGAAACCTCCATTCTCTCATTCATCTTCAATTGTTGGGAAATAAACTTTCTGGTGCAATCCCGCCAACCATAggaaatttgataagtttgagaAGCCTTCTTCTTTGGTCAAATGAGCTCTCGGGACCAATCCCAGCTTCCATTGGAAAATTGGTCAGTTTGGAAAcactttcttttaatgaaaacAAACTTATAGGACCAATCCCAGATTCCATTGGAAAATTGGTCAATTTGGAAACACTTGATTTTAGTGAAAACAAACTTATAGGACCAATCCCAACTTCTTTTGGAAATTTGACAAAGCTCAGCACATTAATTTTGCTTCAAAATAACTTCAGTGGAAGAATTCCCCCAGAAGTGAATAATCTCACTAATTTGGTGAGCTTGCAATTAggttataataatttcattggcCATTTGCCACAACAGATATGCCTTGGCGGGTTATTGACAAAATTCAGTGCTAACAACAACCATTTCACTGGCCCATTTCCTAGAAGCTTGAACAATTGCTCTAGCATTTATAGAGTCAGGGTTGACAATAATCAACTGACAGGAGACATGGCACAAGATTTTGGTGTATATCCAAATTTAGACCATATTGATTTGAgtgacaacaaattttatggcCAACTTGCATCAAACTGGGGCAAATGCCATAACCTTACCAGCCTCGAGATCTCCAACAACAGATTGTCAGGTGGCATACCACCTGAACTTGCCGAGGCAGCCAACTTACAAAGACTTAATCTCTCTTCAAATCATTTGACTGGGGAGATTCCCAAAGAACTGGGAAAGTTGTCATCACTGCTTGATCTCTCATTCAGCAACAACAAGCTTTCAGGCAACATTCCAACAGAAATTGGAATGTTAGAGAAACTTGATCGCTTGGACTTGTCAGCAAACAAGTTAAGCGGTTCCATTCCACAAGTTGTTGGTAACTTGCTCAAATTATGGAGCTTGAATTTCAGCCAAAATAGATTTGACAAAAGCATCCCCTTTGAGATAGGCGACTTACAGATTCTTCAATATCTTGATGTTAGTGGGAATTTGTTGACAGGAACAATACCAACATCTCTTGGCAACCTGAAAAGACTGGAAATCTTGAACCTCTCTCATAACAAGCTTTCTGGAAAAATCCCATCCAGTTTTGATGATTGGTCTAGCTTAAGCTTTGTTGACATAGCTGACAATCAATTATGGGGTCCACTCCCTAATAATCCAGCCTTCCATAGGGCATCGATTGAAGCATTGAAAGATAATCAAGGGTTGTGTGGTAGTGGCTCTGGCCTGGCAGTTTGCCCAACATCGAGTTCTAATTCTCATGGTCAacacagaaagaaaattgtgcTACTGGTCTTGTTCCTCACACTAGGCACTCTATTGCTAGTGTTAGTTGTAGCtatgttttcatataaattttgtcaaagagCAAGAGGAATGCGAAGCCAAGATGCAGAAGTAGAATGTCAAAATCTTTTTGCAGTGTGGAGTTATGATGGAAAAATAGTGTTCGAGAACATCATTGAAGCCACAGAGGATTTTGACAACAAATACCTCATCGGGGCAGGAGGGCAAGGAATTGTTTACAAAGCTGTGCTGTCCACAGGTCAAGTTGTTGCTGTGAAGAAACTTCACTCTGTTACAAATGGAGAAATGTCCAATCTAAAAGCATTTAAAAATGAGGTTCAAGCCTTAACAGAAATCAGGCACCGTAACATTGTGAGGTTGTTTGGCTTTTGCTCACATTCACAATATTCACTTTTGGTTTATGAGTTCTTGGAAGGAGGCAGCTTGGATAAGATACTAAAAGAAGAGACAAAAGCAATTGAATTTGACTGGAAACGAAGGTTGAATGTCATTGAAGGTGTCGCTAACGCTTTATCATATATGCATCATGGCTGCTCACCTCCTATAATTCATCGAGATATTTCAAGCAAGAACATTCTGTTCAATTTGGAATGCCATGCTCACATTTCTGATTTTGGAACAGCTAAGTTTCTCAAACCATACTCAAGCAATTGGACTTCATTTGCTGGCACTTTTGGCTATGCTGCTCCagTGAATGAGAAATGTGatatttatagctttggagTATTAGCTCTTGAAATAATTATGGGACAACATCCGGGAGATCTCATCACCTCTTTGTCATCAACCTCTTCAACAACATATAAATCCTTATTGAAGGATGTGTTGGACCAACGGCTTCCTCATCCTTCGAACTCAGATGCTGAAAAGGTGATCCTAATTGCAAGGATTGCATTTGCTTGCTTGAGCGAAAGTCCTAGTTCTCGCCCAACCATGGAACAAGTATCCAAGGCAATCGTCATACCAAAGACTCTTCCAATGGACCAATTCCACATTATCACAATTGGACAACTCCTGAAAGATTG 3668 0.3751 MSMFNSHPTPIWWVLTILLFAHALVFSSSNFFGSSITASFALAAADGTLNDEANALLRWKTSYDNQSQAFLSSWTGNSPCNWQGITCDLTKSVSHIDLSSLGLRGPLHTLNFSSLSNLISFHIFNNSFYGTIPRQVGKMSKMSSFQVHINNLSGVFPSEILQLPMLYELDLGANSFSGTFPQEIETLKSLSYFSTYACNFTGSLPISIGKLTNLSYLNVGNNQLSGPIPMEIWKLSNLTQLILFSNNFFGGIPSTIRNLCSLQVIYLQNNNLSGQIPMEIRKLTNLTILILYSNNLSGSIPEEIGTLTNLIELDLSTNHFSGRIPSTIGNLFSLQVLSLHNNDLSGQIPMEIRKLSNLIRLILNSNNFSGSIPEEIGTLTNLFELDLSRNYFSGRIPSTIGKLSKLQFLYLYVNNLSGSIPNEVGNLHSLIHLQLLGNKLSGAIPPTIGNLISLRSLLLWSNELSGPIPASIGKLVSLETLSFNENKLIGPIPDSIGKLVNLETLDFSENKLIGPIPTSFGNLTKLSTLILLQNNFSGRIPPEVNNLTNLVSLQLGYNNFIGHLPQQICLGGLLTKFSANNNHFTGPFPRSLNNCSSIYRVRVDNNQLTGDMAQDFGVYPNLDHIDLSDNKFYGQLASNWGKCHNLTSLEISNNRLSGGIPPELAEAANLQRLNLSSNHLTGEIPKELGKLSSLLDLSFSNNKLSGNIPTEIGMLEKLDRLDLSANKLSGSIPQVVGNLLKLWSLNFSQNRFDKSIPFEIGDLQILQYLDVSGNLLTGTIPTSLGNLKRLEILNLSHNKLSGKIPSSFDDWSSLSFVDIADNQLWGPLPNNPAFHRASIEALKDNQGLCGSGSGLAVCPTSSSNSHGQHRKKIVLLVLFLTLGTLLLVLVVAMFSYKFCQRARGMRSQDAEVECQNLFAVWSYDGKIVFENIIEATEDFDNKYLIGAGGQGIVYKAVLSTGQVVAVKKLHSVTNGEMSNLKAFKNEVQALTEIRHRNIVRLFGFCSHSQYSLLVYEFLEGGSLDKILKEETKAIEFDWKRRLNVIEGVANALSYMHHGCSPPIIHRDISSKNILFNLECHAHISDFGTAKFLKPYSSNWTSFAGTFGYAAPVNEKCDIYSFGVLALEIIMGQHPGDLITSLSSTSSTTYKSLLKDVLDQRLPHPSNSDAEKVILIARIAFACLSESPSSRPTMEQVSKAIVIPKTLPMDQFHIITIGQLLKD 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01502 1222 PRINTS Leucine-rich repeat signature 787 800 - -
Bva04g01502 1222 PRINTS Leucine-rich repeat signature 718 731 - -
Bva04g01502 1222 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 16 347 - -
Bva04g01502 1222 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 337 466 - -
Bva04g01502 1222 SUPERFAMILY RNI-like 95 393 - -
Bva04g01502 1222 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 347 - -
Bva04g01502 1222 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 337 466 - -
Bva04g01502 1222 Pfam Protein kinase domain 941 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01502 1222 Pfam Leucine rich repeat 766 824 IPR001611 GO:0005515
Bva04g01502 1222 SUPERFAMILY Protein kinase-like (PK-like) 925 1199 IPR011009 -
Bva04g01502 1222 Gene3D Ribonuclease Inhibitor 236 403 IPR032675 -
Bva04g01502 1222 Gene3D Ribonuclease Inhibitor 571 860 IPR032675 -
Bva04g01502 1222 Gene3D Ribonuclease Inhibitor 404 570 IPR032675 -
Bva04g01502 1222 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 289 421 - -
Bva04g01502 1222 SMART LRR_typ_2 211 235 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 307 331 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 499 522 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 739 763 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 283 305 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 403 427 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 547 571 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 668 691 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 355 379 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 715 738 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 451 475 IPR003591 -
Bva04g01502 1222 SMART LRR_typ_2 787 810 IPR003591 -
Bva04g01502 1222 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 410 1220 - -
Bva04g01502 1222 SMART LRR_sd22_2 691 710 - -
Bva04g01502 1222 SMART LRR_sd22_2 499 525 - -
Bva04g01502 1222 SMART LRR_sd22_2 787 813 - -
Bva04g01502 1222 SMART LRR_sd22_2 283 315 - -
Bva04g01502 1222 SMART LRR_sd22_2 475 494 - -
Bva04g01502 1222 SMART LRR_sd22_2 715 741 - -
Bva04g01502 1222 SMART LRR_sd22_2 211 240 - -
Bva04g01502 1222 Pfam Leucine rich repeat N-terminal domain 50 88 IPR013210 -
Bva04g01502 1222 Pfam Leucine Rich Repeat 669 691 IPR001611 GO:0005515
Bva04g01502 1222 Pfam Leucine Rich Repeat 501 523 IPR001611 GO:0005515
Bva04g01502 1222 Gene3D Phosphorylase Kinase; domain 1 900 1017 - -
Bva04g01502 1222 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1063 1075 IPR008266 GO:0004672|GO:0006468
Bva04g01502 1222 Gene3D Ribonuclease Inhibitor 51 162 IPR032675 -
Bva04g01502 1222 Gene3D Ribonuclease Inhibitor 163 235 IPR032675 -
Bva04g01502 1222 Gene3D Transferase(Phosphotransferase) domain 1 1018 1205 - -
Bva04g01502 1222 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 410 1220 - -
Bva04g01502 1222 SUPERFAMILY RNI-like 293 632 - -
Bva04g01502 1222 ProSiteProfiles Protein kinase domain profile. 939 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01502 1222 SUPERFAMILY L domain-like 603 850 - -
Bva04g01502 1222 ProSiteProfiles Leucine-rich repeat profile. 669 692 IPR001611 GO:0005515
Bva04g01502 1222 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 289 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01502 Bva-Chr4 15301957 15305446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01502 36 734 Receptor kinase-like Gene Family AT4G08850 33.381 3.48e-99 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01502 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01502 - - gmx:106794215 1179.47