Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01501 ATGTATTGCAACTTTAAGGAGAATGCTGCTGAGCACATTAAGCAAGCAGTTCATGAAGATGATGCAGGAAACTATAGAACGGCTTTGACCCTTTATATGAGTGCATTAGAATACTTAAAGGTCCATTTGAAGTATGAAAAGAACCCCAAGATTAAGGAAACTGTAACTgagaaatttattgattacttGAGGAGGACAGAGGAGATACGTGCCATTCTTGATACAGGAGGGAGTGGAACTAAGAGTGGAGATGAGAGAGACAAGGAGGATCCAGAGAAAGCAAAGCTCAAGGCTGGTCTTGATTCTGTAATAATTAGAGAGAAACCAAATGTTAGATGGAATGACGTTGCTGGGCTTGAGAGTGCCAAACAGGCCTTACAAGAAGCTGTCATATTGCCAGTTAAATTCCCACAGATTTTTACTGGGAAGAGGAAACCATGGAGAGCATTTCTGTTATATGGCCCACCTGGAACAGGGAAGTCATATTTAGCAAAGGCTGTAGCAACCGAAGCAGACTCTACATTTTTCAGCGTTTCATCATCTGATCTTGTTTCGAAATGGATGGGTGAAAGTGAAAAGCTGGTATCCAGTCTTTTCCAAATGGCTCGCGAGAGTGCtccatcaataatttttattgatgaaatagATTCTCTATGTGGTCAACGAGGTGAAGGCAATGAAAGTGAAGCATCTAGACGCATCAAAACAGAACTTCTTGTACAAATGCAGGGTGTTGGGAAAGAAGATCAGAAAGTTCTTATTCTTGCAGCAACCAATACTCCTTATGCTCTGGATAAGGCCATCCGAAGACGATTTGACAAACGAATATACATCCCTCTTCCAGACCTAAAGGCAAGGCAGCACATGTTTAAGGTGCATCTTGGAGATACTCCTCATAATTTGACTGAGAAGGATTTTGAGGAATTGGCCTACAAAACAGATGGATTTTCTGGTTCTGATATTTCTGTTTGTGTTAATGAAGTTCTATTTGAACCTGTTCGTAAAACTTGGGATGCTAAGTTCTTTAGAGAAACATCTAATGGAATGTGGATTCCTTGTGAGCCCAATGAAGAAGGAGCTGTTAACATTAGCCTCCAGGAACTTGATGCACAAGGACTTGCTTTAAAGATTCTTCCACCAGCCATCACAAGAGCAGATTTTGATAAGATCTTGGCAAAGCAGAAGCCGACAGTAAGTAAGGCTGACCTTGAGGTGCATGAGAGATTTACTCAAGAGTTTGGGGAGGAGGGTTG 1253 0.4038 MYCNFKENAAEHIKQAVHEDDAGNYRTALTLYMSALEYLKVHLKYEKNPKIKETVTEKFIDYLRRTEEIRAILDTGGSGTKSGDERDKEDPEKAKLKAGLDSVIIREKPNVRWNDVAGLESAKQALQEAVILPVKFPQIFTGKRKPWRAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGKEDQKVLILAATNTPYALDKAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTEKDFEELAYKTDGFSGSDISVCVNEVLFEPVRKTWDAKFFRETSNGMWIPCEPNEEGAVNISLQELDAQGLALKILPPAITRADFDKILAKQKPTVSKADLEVHERFTQEFGEEG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01501 417 SMART AAA_5 146 282 IPR003593 -
Bva04g01501 417 Gene3D - 6 75 - -
Bva04g01501 417 CDD AAA 117 280 - -
Bva04g01501 417 Pfam ATPase family associated with various cellular activities (AAA) 151 280 IPR003959 GO:0005524|GO:0016887
Bva04g01501 417 Pfam Vps4 C terminal oligomerisation domain 350 414 IPR015415 -
Bva04g01501 417 Pfam MIT (microtubule interacting and transport) domain 8 70 IPR007330 -
Bva04g01501 417 SMART smart 2 79 IPR007330 -
Bva04g01501 417 PANTHER AAA DOMAIN-CONTAINING 1 417 - -
Bva04g01501 417 SUPERFAMILY MIT domain 4 78 IPR036181 -
Bva04g01501 417 ProSitePatterns AAA-protein family signature. 252 271 IPR003960 GO:0005524|GO:0016887
Bva04g01501 417 Gene3D - 109 405 IPR027417 -
Bva04g01501 417 PANTHER PROTEIN SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 1 417 - -
Bva04g01501 417 Gene3D - 282 397 - -
Bva04g01501 417 MobiDBLite consensus disorder prediction 74 93 - -
Bva04g01501 417 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 412 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01501 Bva-Chr4 15296325 15300839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01501 145 338 Calmodulin-binding Proteins AT3G56690 36.735 1.10e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01501 K12196 - zju:107404066 696.041