Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01486 atgaaaatgCCCAGAATTTATATCTGTTATCCTGAAAAGtttcttcttctgggTCATAAGGATAGAGGCAATTCTTGGGGCATAACTGAGAATGCTGCTGAGTACATTAAGCAAGCAGTTCATGAAGATGATGCAGGAAACTATAGAAAGGCTTTGACCCTTTATATGAGTGCATTAGAATACTTAAAGGTCCATTTGAAGTATGAAAAGAACCCCAAGATTAAGGAAACTGTAACTGAGAAATTTATTGACTACTTGAGGAGGGCAGAAGAGATACGTGCCATTCTTGATACAGGAGGGAGTGGAACTAACTTGAATAATGAAGCAGCCGATGCTGTAAGAGTGGAGATGAGAGAGACTAGGAGGATCCAGAGAAAGCAAAGCTCAAGGCTGGCCTTACAAGAAGCTGTCATATTGCCAGTTAAATTCCCACAATTTTTGACTGGGAAGAGGAAACCATGCAGAGCATTTCTGTTATATGGCCCACCTGGAACAGGTAAGTCATATTTAGCAAAGGCTGTAGCAACCGAAGTAGACTCTACATTTTTCAGCGTTTCATCATCTGATCTTGTTTCGAAATGGATGGGTGAAAGTGAAAAGCTGGTATCCAGTCTTTTCCAAATGGCTCGCGAGAGTGCtccatcaataatttttattgatgaaatagATTCTCTATGTGGTCAACGAGGTGAAGGCAATGAAAGTGAAGCATCTAGACGCATCAAAACAGAACTTCTTGTACAAATGCAGGTGTTAGGAAAGAAGATCAGAAAGTTCTTATTCTTGCAGCAACCAATACTCCTTATGCTCTGGATAAGGCCATCCGAAGACGATTTGACAAACGAATATACATCCCTCTTCCAGACCAAAAGGCAAGGCAGCACATGTTTAAGGTGCATCTTGGAGATACTCCTCATAATTTA 923 0.39 MKMPRIYICYPEKFLLLGHKDRGNSWGITENAAEYIKQAVHEDDAGNYRKALTLYMSALEYLKVHLKYEKNPKIKETVTEKFIDYLRRAEEIRAILDTGGSGTNLNNEAADAVRVEMRETRRIQRKQSSRLALQEAVILPVKFPQFLTGKRKPCRAFLLYGPPGTGKSYLAKAVATEVDSTFFSVSSSDLVSKWMGESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQVLGKKIRKFLFLQQPILLMLWIRPSEDDLTNEYTSLFQTKRQGSTCLRCILEILLII 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01486 307 PANTHER AAA DOMAIN-CONTAINING 29 119 - -
Bva04g01486 307 PANTHER AAA DOMAIN-CONTAINING 127 262 - -
Bva04g01486 307 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 127 262 - -
Bva04g01486 307 SMART smart 25 102 IPR007330 -
Bva04g01486 307 Pfam MIT (microtubule interacting and transport) domain 30 93 IPR007330 -
Bva04g01486 307 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN 29 119 - -
Bva04g01486 307 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 250 IPR027417 -
Bva04g01486 307 Gene3D - 130 259 IPR027417 -
Bva04g01486 307 Pfam ATPase family associated with various cellular activities (AAA) 158 261 IPR003959 GO:0005524|GO:0016887
Bva04g01486 307 SMART AAA_5 153 276 IPR003593 -
Bva04g01486 307 SUPERFAMILY MIT domain 27 102 IPR036181 -
Bva04g01486 307 Gene3D - 28 98 - -
Bva04g01486 307 CDD AAA 155 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01486 Bva-Chr4 15166167 15172532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01486 133 256 Calmodulin-binding Proteins AT3G56690 45.669 8.99e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01486 K12196 - egr:104421293 325.094