Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01470 ATGTCCCTCTTCAATTCTCAGCCTATACAAATTTCAAGGGTTCTatccattttattctttgccCATGCTgtggttttttcttcttccaattattttcattcttccaTCACTGCATCTTTCGCCTTTGTTTATGCTGATGACATGGTTGACAATGCAGTAAATGCTCTCTTACGATGGAAAACCAGCTTTGACAACCAAAGCCAAGCTCTCCTTTCTTCATGGACAGGAAGAATACCATCTCTTGGCAAGCTGCAATGCTTGGAGACTTTGACCCTCTCACATAATAAGCTTTCTGGCTCGGAGCTTTGCCTAACATCAACTCCTAATTCCCACGCTCAACACGGTAAAAAAGTTGTGCTACTTGCTTTCTCAGTTACAATTGGCACTCTATTGCTAGTCTCACATTTTGGAAGAGCTAGGCTTCTCAAACTAGACTCGAGAAATTGGACCTCATTTGTTGGCACATTTGGCCACTCTGCACCTGAGCTTGTTTATACTGTAGAAGTGAACGAGAAATCTGATGTATATAACTTTGGAGTATTGGCTTTAGAAATAATTATGGGAAAACATCCAAGAGATCTCATCTCCTCTTTGTCATCAACCTCTTTTGCAAATATAGCAACATCAACAGCCTATAATTCCAAATTGAAGGATGTGTTGGACCAACGCCTTCCTCTTCCTACAAACCCAGTTGCTGAAAAGCTGATCCTAATTGCAAGGACTGCATTTGCTTGCTTGAGTGAAAGTCCTCATTCTTGCCCAACCATGGATCAAGTATCTAAGTCTATTGTCATGCCAAAGTCTCCTCCATTGAACCAATTCCATATGATCACACTAGGACAACTCCGAGACGATTG 857 0.3909 MSLFNSQPIQISRVLSILFFAHAVVFSSSNYFHSSITASFAFVYADDMVDNAVNALLRWKTSFDNQSQALLSSWTGRIPSLGKLQCLETLTLSHNKLSGSELCLTSTPNSHAQHGKKVVLLAFSVTIGTLLLVSHFGRARLLKLDSRNWTSFVGTFGHSAPELVYTVEVNEKSDVYNFGVLALEIIMGKHPRDLISSLSSTSFANIATSTAYNSKLKDVLDQRLPLPTNPVAEKLILIARTAFACLSESPHSCPTMDQVSKSIVMPKSPPLNQFHMITLGQLRDD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01470 285 Gene3D Transferase(Phosphotransferase) domain 1 128 274 - -
Bva04g01470 285 SUPERFAMILY Protein kinase-like (PK-like) 131 262 IPR011009 -
Bva04g01470 285 Gene3D Ribonuclease Inhibitor 49 113 IPR032675 -
Bva04g01470 285 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 77 - -
Bva04g01470 285 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01470 285 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 132 283 - -
Bva04g01470 285 Pfam Protein tyrosine and serine/threonine kinase 133 260 IPR001245 GO:0004672|GO:0006468
Bva04g01470 285 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 77 - -
Bva04g01470 285 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 132 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01470 Bva-Chr4 14921420 14924920 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01470 133 260 Receptor kinase-like Gene Family AT1G16150 32.558 1.16e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva04g01470 PK_Tyr_Ser-Thr 3.1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01470 - - csin:114270995 185.652