Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01448 ATGGGGTATATGGCTCCagAGTATGGATTGGAAGGAATTGTTTCTATGCAAATTGATGTATATAGCTATGGCATTTTGCTTATGAAAACCTTCACTGGAAAGAAGCCCACGGACGAAATGTTCCGTGGAGAATTTAGCATCAAGAAGTGGGTGAAAGACTTTTACCCTGATGCAATAATTGATGTTATTGGTGGCCAACTCTTGGCTGAAGAAAGAAGGCAGTTAGCTATTAAGAAGGATTGCTTACTATCAATCATTGCATTAGCATTGGAATGTTCAACAGATTCACCCAATGAAAGGAGAAATATGAATGAAGTATTAGCTGCACTCAAGAAGATCAGAACCAAGTTTTTGAATGAACCTTG 365 0.3808 MGYMAPEYGLEGIVSMQIDVYSYGILLMKTFTGKKPTDEMFRGEFSIKKWVKDFYPDAIIDVIGGQLLAEERRQLAIKKDCLLSIIALALECSTDSPNERRNMNEVLAALKKIRTKFLNEP 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01448 121 SUPERFAMILY Protein kinase-like (PK-like) 2 115 IPR011009 -
Bva04g01448 121 Pfam Protein tyrosine and serine/threonine kinase 3 109 IPR001245 GO:0004672|GO:0006468
Bva04g01448 121 Gene3D Transferase(Phosphotransferase) domain 1 1 120 - -
Bva04g01448 121 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01448 121 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 119 - -
Bva04g01448 121 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01448 Bva-Chr4 14688745 14689238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01448 1 118 Receptor kinase-like Gene Family AT3G47570 38.136 3.24e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva04g01448 PK_Tyr_Ser-Thr 2.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01448 - K13420 aip:107613554 149.058