Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01440 ATGGATCACACTGCGAAGACAAACACAACCCAGCACTTGCCTGACGCAAATAGGGTCAACGCGTCCAAAGATACTACTTTGGAACTTTTGCATGATAATTCTACAAACTGCAGAATTGCTTGTATTCTTATCTTGAGAATTGGTATTGATCAACCATTTGAGAGTCACATTCTTAGGGAAGAGGAAACCGTGGAGAGCATTTCTGTTATAGGCCCACCTGGAAGAGGGAACTCATATCTAGCAAAGGCTGTAGCAACCGAAGCAGACTCTACATTTTTCAGCGTTTCATCATCTGATCTTGTTTCGAAATGGATGGGTGAAAGTGAAAAGCTGGTATACAGTCTTTTCCAAATGGCTCGCGAGAGTGCtccatcaataatttttattgatgaaatagATTCTCTATGTGGTCAACGAGGCGAAGGCAATGAAAGTGAACATCTAGACGCATCAAAACAGAACTTCTTGTACAAATGCAGGGTGTTGGGAAAGAAGATCAGAAAGTTCTTATTCTTGCAGCAACCAATACTCCTTATGCTCTGGATAAGGTGCATCTTGGAGATACTCCTCATAATTTA 578 0.3997 MDHTAKTNTTQHLPDANRVNASKDTTLELLHDNSTNCRIACILILRIGIDQPFESHILREEETVESISVIGPPGRGNSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVYSLFQMARESAPSIIFIDEIDSLCGQRGEGNESEHLDASKQNFLYKCRVLGKKIRKFLFLQQPILLMLWIRCILEILLII 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01440 192 Gene3D - 62 166 IPR027417 -
Bva04g01440 192 PANTHER PROTEIN SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 67 172 - -
Bva04g01440 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 158 IPR027417 -
Bva04g01440 192 SMART AAA_5 63 192 IPR003593 -
Bva04g01440 192 Pfam ATPase family associated with various cellular activities (AAA) 69 154 IPR003959 GO:0005524|GO:0016887
Bva04g01440 192 PANTHER AAA DOMAIN-CONTAINING 67 172 - -
Bva04g01440 192 CDD AAA 38 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01440 Bva-Chr4 14621064 14623765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01440 67 144 Calmodulin-binding Proteins AT3G56690 55.128 1.33e-20 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01440 K12196 - cit:102616626 148.673