Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01435 ATGGGATCGGAACCTCTTCTTCCGAAATGGGCATCGAAACCTTGCATCATGGGAATTGACGAAGCTGGACGAGGTCCTGTTTTAGGGCCCATGGTGTATGGATGCTTATACTGTGCTCACTCTTATCAGAAAACCCTTGCAAGTTTGAGTTTTGCAGATTCTAAGAcactaaaagaagaaaagagggaagAACTATTTGAAAGCTTGAAGGTCAATGAATCAATTGGATGGGCAGTTGACATATTGGACCCAAGGGAACTCTCAGCTAAAATGCTCAAGGAGGACAAGATAAACCTGAATGAGATATCACATGAATCTGCCATGGGCCTTATTGATAGGGTTTTGAAAATGGGAGTTCTTCTCACTGAGGTTTATTTAGATACAGTTGGAGATGTGGcgaaatatgaaataaaactgTCTAAACATTTTCCTTCTATCAAATTTGTGGTTGCAAAGAAGGCTGATAGTCTTTATCCTGTTGTGAGTGGTGCAAGCATAGTTGCAAAGGTCACAAGAGACCGAGCATTGCGGGAGTGGGTGCTTGATGAGACTGCTGAAAACATGCATAGAAACTTTGGCTCTGGATATCCTGGAGATCCCCAAACCAAGTCCTGGATGGAGGATCACAAACATTCCGTATTTGGATTCCCAACATTAGTTCGATTCAGTTGGGGAACCTGCAATGCATACTCCAAAGATATTGCAGATGTCTTATGGGAATCTAATAAAACAGATGAAGAGGGTGGTGGCAGTAGTAGCAGTCGCAAGAGgcaattaaaattaagcaaTGTAGGTTTCCCTACATCCAAGAGAAGTGAAGAAATAGAATCAAGTGGCAAAGGACGCTGCAAATTTTTCCAGGCTCGTAAACTTGAGCATGTAACTTCTTTCTG 893 0.3998 MGSEPLLPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCAHSYQKTLASLSFADSKTLKEEKREELFESLKVNESIGWAVDILDPRELSAKMLKEDKINLNEISHESAMGLIDRVLKMGVLLTEVYLDTVGDVAKYEIKLSKHFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALREWVLDETAENMHRNFGSGYPGDPQTKSWMEDHKHSVFGFPTLVRFSWGTCNAYSKDIADVLWESNKTDEEGGGSSSSRKRQLKLSNVGFPTSKRSEEIESSGKGRCKFFQARKLEHVTSF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01435 297 MobiDBLite consensus disorder prediction 254 272 - -
Bva04g01435 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Bva04g01435 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 7 297 IPR001352 GO:0003723|GO:0004523
Bva04g01435 297 PANTHER RIBONUCLEASE 7 297 - -
Bva04g01435 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Bva04g01435 297 SUPERFAMILY Ribonuclease H-like 15 231 IPR012337 -
Bva04g01435 297 CDD RNase_HII_eukaryota_like 17 228 - -
Bva04g01435 297 TIGRFAM TIGR00729: ribonuclease HII 16 229 IPR004649 GO:0004523|GO:0016070
Bva04g01435 297 Gene3D - 3 186 IPR036397 GO:0003676
Bva04g01435 297 Gene3D Ribonuclease hii. Domain 2 187 235 IPR023160 GO:0004523
Bva04g01435 297 MobiDBLite consensus disorder prediction 243 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01435 Bva-Chr4 14531714 14535530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01435 1 297 Core DNA Replication Machinery Family AT2G25100 68.456 6.94e-149 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01435 K10743 - gmx:100779875 505.368