Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01389 ATGGCTCATGATGAACTTTTGGAGGCATTACAAGATGATGAAGTTTTCATGGTTGGATCGTATGAAATGGGGGGATGTGGTAAAACCACATTGGCAAAACATGTAGGTAATGAAGCAGAGAACATTTTTGATAAAGTGGCTTTTGCTGTTGTGTCTAATAATGTGGATGTTCATAAGATACAAGGTGAAATCGCAAGCTACTTAGATTTgctactaaaagaaaaagaatcaacaTTGGAGAGAGCTAGGAGATTGTGGGCAAGATTAGCTAGTGGACAAAAGATTCTTATAATTCTTGATGATATGTGGGGAAAACTTGATTTCGAAGTCATAGGAATCCCCTTTGGTGAAAATTGCACAGGTTGCAAGGTTCTCCTAACTACTAGACGTTTGCAAGTATGCAATGTGATAAGCTGTCAAAGAACAATTTCGTTATCACTCTTAAATGCAGAAGAAGCCTGGACTCTATTTCAAAAGCATTCAGGTATAGTTGATGAGACCTCTGATTCTTTGAAGGATCTAGCAAAAGAGATTGTGAAAGATTGTACAGGATTGCCAATTGCAATTGAAGCTGTGGCAAGCactttgaaaggaaaaagcGAAAGTGGATGGGAGGAATCATTGGAAAGACCTAAAGAAACTACACTGATAGATGTTGAAGAAGGTCTAAGAGATCCACACACATGCTTGCAACGGAGTTATGACAATCTCAGAGATAAAGAAGCTAAGTCAATATTCTTGTTGTGCTCTATATTTCCAAAAGATTGTGAAATTCATGAAGAATATTTAACTAGATATGGGATTGGGCTAGGCCTATTTGGTGAAGTTAGCTCTTACGCAAGAGCTAGAAATAAAGTTCTTGAagctaaaaataaacttataaatttttgtttgttgctGAAAGGTAATAAAGAGAATTATGTGGAAATGCATAATGTAGTTCGTGCCATGGCTCTGTCTGtggcaaagaaagaaaagaagGAAGCCTTGAGAGACTTGAATCTCGTCTTGTGGTCTTGCTCATTTGTGGAATTGCCAGATAAAATTACAGAGCTACCAAAGTTAAGATTGTTGGATTTGTGGTATTGTGTAATTAAAAGGAATCCTGGTGAAGTGATTAGAAGATGCTCTCAACTAgaagaattatattttcttcgtAATAGTGGATGgaaggaagaaggagaaataGCTGTTGTTGCTGCCTCAGCTTTGCATTGGTATCGCATAGATTTAGGAGGATGTTATCAATCTGGGGAAGAAGACTTTTCTATCACAAGAGGCTTATGGATGAAAATTTTTGATGCTTTCACCACCAATGCAACAATTAAGGATTTGGCACAAAGAGCAGAATTTCTTGAAATACAAGAAATAGTGAACAGTGGTAGTAAGAATATTATCCCCGTTTATACCCAAAAAAAGAACATGGCTGATGCAAAAGGAGGAGGTATAAATGAGCTAACAAAACTTCACCTTTGGAATTTTGATAAGATAGAGTGCATTGCTGACACTAGTGATCCTTCGATGATTGAAAATGCCTTCTCCAACTTGGTTAAGCTTCATATCTCGCAACTAAAGGGTTTGAAAACTTTGTGCCATGGTCCACATGTAGGGAACTTGAAGCTGTTTTGCAGTCTGAAGGTATTGTCACTCAGCTATTGTCCTATGATGACGTCTGTCTTCACGTGTGTTGTTGCTCAAAGTCTGGTAGTGTTGGAAGAACTGGAAATAAAAGACAGTGATGGACTAAAGCACATAGTAAGAGATGAAGAGAAGGATAATAATGACAAGCATTACAATTTAATGTTCCCAAAATTGCGGAGGCTTTCTATCTCTGACTGCTATAAACTGGAATACTTATTTCAGTCTCTTTTGATGAGAGCCTTGTACAATTA 1892 0.3525 MAHDELLEALQDDEVFMVGSYEMGGCGKTTLAKHVGNEAENIFDKVAFAVVSNNVDVHKIQGEIASYLDLLLKEKESTLERARRLWARLASGQKILIILDDMWGKLDFEVIGIPFGENCTGCKVLLTTRRLQVCNVISCQRTISLSLLNAEEAWTLFQKHSGIVDETSDSLKDLAKEIVKDCTGLPIAIEAVASTLKGKSESGWEESLERPKETTLIDVEEGLRDPHTCLQRSYDNLRDKEAKSIFLLCSIFPKDCEIHEEYLTRYGIGLGLFGEVSSYARARNKVLEAKNKLINFCLLLKGNKENYVEMHNVVRAMALSVAKKEKKEALRDLNLVLWSCSFVELPDKITELPKLRLLDLWYCVIKRNPGEVIRRCSQLEELYFLRNSGWKEEGEIAVVAASALHWYRIDLGGCYQSGEEDFSITRGLWMKIFDAFTTNATIKDLAQRAEFLEIQEIVNSGSKNIIPVYTQKKNMADAKGGGINELTKLHLWNFDKIECIADTSDPSMIENAFSNLVKLHISQLKGLKTLCHGPHVGNLKLFCSLKVLSLSYCPMMTSVFTCVVAQSLVVLEELEIKDSDGLKHIVRDEEKDNNDKHYNLMFPKLRRLSISDCYKLEYLFQSLLMRALYN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01389 630 SUPERFAMILY RNI-like 335 617 - -
Bva04g01389 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 249 IPR027417 -
Bva04g01389 630 PANTHER - 4 325 - -
Bva04g01389 630 CDD AAA 25 128 - -
Bva04g01389 630 Gene3D - 2 144 IPR027417 -
Bva04g01389 630 Gene3D Ribonuclease Inhibitor 319 420 IPR032675 -
Bva04g01389 630 Pfam NB-ARC domain 6 210 IPR002182 GO:0043531
Bva04g01389 630 Gene3D - 147 233 IPR042197 -
Bva04g01389 630 Gene3D Ribonuclease Inhibitor 481 628 IPR032675 -
Bva04g01389 630 Gene3D - 234 318 IPR036388 -
Bva04g01389 630 PANTHER PHOSPHATASE, PUTATIVE-RELATED 4 325 - -
Bva04g01389 630 PRINTS Disease resistance protein signature 89 103 - -
Bva04g01389 630 PRINTS Disease resistance protein signature 17 32 - -
Bva04g01389 630 PRINTS Disease resistance protein signature 540 556 - -
Bva04g01389 630 PRINTS Disease resistance protein signature 182 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01389 Bva-Chr4 12927907 12930200 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01389 18 331 WRKY Transcription Factor Family AT5G45050 25.000 4.40e-12 67.8