Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01381 ATGTCTCGGGAATTGAACAACTTGTTGCCGAGTCAGACCCAGTCGACTGAGTGGACTCGATTCCACGACAAGCTGTTTGAACTAGCGCTCGTGACCGTCCCCGAGGACTCGCCGGATCGGTGGGAGAAAATCGCCGAGAAAATGCCCGGAAAGTCGCCGGAGGAGATGAAATACCGCTACGAGGCTTTGGTCCGTGACGTCTTGGCGATTGAGTCGGGTTTTGTCGAAGTACCCAAATACCCTGATGATGCGGCGGCTTCGCCGGAGAGGGTGTCAGACTCTGAGAATCAGTTTCCTGTGCCTAGGCCGAGGAAGAGAGGGACTCCGTGGAGTGAAGAGGAACACCAGCGATTTCTCTTGGGACTAGAGAAATATGGCAAGGGAGATTGGAGAAgcatttcaagaaattttgttgTGACAAGATCTCCAACTCAGGTAGCAAGCCACGCCCAGAAGTACTTCCTTCGCCAGAGTTCCGCAAATAAGGAGAGGAGACGAGCAAGCATCCACGACATAACCACGGTGGACCCCAACAAGGTGGCGCCAGTCATGAGTCAGGTGGAGCAATTCCTTCGCCAGAATTCGGCGAATAATGAAAGGGATCCGGTAAGCACCACGGTGGACCCCAACGTAGTGGTGCCTGTGGTGCCTCCGGCCATTGGGTCGGAGGAAGACCGGAATTGGACCGATAATGAGAGGAGACTAGTCAGCATCCATGGTATAACCCCAGTGGACTCCAACCGACTGCCTCCAGCCATCGTCCCTGGGGAAAACATTCTTCACCAGAACTGGGTGAATAATGAGAGGACACTAGCAGGCATACAAGACATGATTAAAGTGGACTCCAACCCGGCGACTCCGGCTGTTGGTCAGAACTGGGTTGCTCCTTCAGAACCACCGGAGATCCAGCAGTGGAACCTACCATACGATTTTCCTGATCAGATGGGAGGATATGGTGGGTATACTAACTATGGTTTCCATTG 983 0.5249 MSRELNNLLPSQTQSTEWTRFHDKLFELALVTVPEDSPDRWEKIAEKMPGKSPEEMKYRYEALVRDVLAIESGFVEVPKYPDDAAASPERVSDSENQFPVPRPRKRGTPWSEEEHQRFLLGLEKYGKGDWRSISRNFVVTRSPTQVASHAQKYFLRQSSANKERRRASIHDITTVDPNKVAPVMSQVEQFLRQNSANNERDPVSTTVDPNVVVPVVPPAIGSEEDRNWTDNERRLVSIHGITPVDSNRLPPAIVPGENILHQNWVNNERTLAGIQDMIKVDSNPATPAVGQNWVAPSEPPEIQQWNLPYDFPDQMGGYGGYTNYGFH 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01381 327 MobiDBLite consensus disorder prediction 81 110 - -
Bva04g01381 327 SUPERFAMILY Homeodomain-like 6 73 IPR009057 -
Bva04g01381 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 158 IPR017930 -
Bva04g01381 327 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 105 157 IPR006447 GO:0003677
Bva04g01381 327 SUPERFAMILY Homeodomain-like 103 159 IPR009057 -
Bva04g01381 327 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 12 195 - -
Bva04g01381 327 SMART sant 106 156 IPR001005 -
Bva04g01381 327 SMART sant 14 66 IPR001005 -
Bva04g01381 327 CDD SANT 17 64 IPR001005 -
Bva04g01381 327 ProSiteProfiles SANT domain profile. 105 158 IPR017884 -
Bva04g01381 327 Pfam Myb-like DNA-binding domain 109 154 IPR001005 -
Bva04g01381 327 CDD SANT 109 154 IPR001005 -
Bva04g01381 327 Gene3D - 108 159 - -
Bva04g01381 327 Gene3D - 10 77 - -
Bva04g01381 327 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 12 195 IPR043363 -
Bva04g01381 327 ProSiteProfiles Myb-like domain profile. 102 154 IPR001005 -
Bva04g01381 327 ProSiteProfiles Myb-like domain profile. 10 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01381 Bva-Chr4 12791494 12793450 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva04g01381 Myb_DNA-binding 4.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01381 - - gmx:547481 229.18