Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01379 ATGTCTCCAGGATCCAACAATGCAACGCCGAGTAAGACCTCGTCGACTCACTGGACTTGGCACGAAAATAAGGCCTTTGAGAATGCTATCGCCGTCGTCCCCGAGGACTTGCCGAACCGGTGGGAGAAAATCGCCACACAACTGCCCGGAAAGTCGCTGGAGGAGATCAAAGACCACTACGATGCTTTGGTCCGTCACGTCAAGGATATTGAGTCAGGTCTTGTGAAGCTACCCGATTACCGTGATGACGTGGAGGCTTCGTCGGAGAGGGTGTGGGACTCTATGAATCTGTCCTCCTCTTA 302 0.5331 MSPGSNNATPSKTSSTHWTWHENKAFENAIAVVPEDLPNRWEKIATQLPGKSLEEIKDHYDALVRHVKDIESGLVKLPDYRDDVEASSERVWDSMNLSSS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01379 100 Pfam Myb-like DNA-binding domain 17 60 IPR001005 -
Bva04g01379 100 SUPERFAMILY Homeodomain-like 16 71 IPR009057 -
Bva04g01379 100 PANTHER TRANSCRIPTION FACTOR DIVARICATA-LIKE ISOFORM X1 9 97 - -
Bva04g01379 100 ProSiteProfiles Myb-like domain profile. 18 64 IPR001005 -
Bva04g01379 100 Gene3D - 9 77 - -
Bva04g01379 100 SMART sant 14 66 IPR001005 -
Bva04g01379 100 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 9 97 IPR043363 -
Bva04g01379 100 CDD SANT 18 60 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01379 Bva-Chr4 12766784 12767086 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva04g01379 Myb_DNA-binding 6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01379 - - cit:102626223 98.2117