Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01360 ATGAACTGCCCAGGAAATGAAAGAGAGCAACTGTTATCCAATAAGAGGAAATGTCCCAACTGTGAAGCCTCAGGGATTTCGACGAGAAGATTCTGCAAGAACACATATTTTGAAGAAGAGAAGCATGAGGGTGTTTCCACGACACTGAAGCTTTATGAGGACCCATGGAAGATCAAGAAGACGCTGACCGCCAGCGATTTGGGAGTCTTGAGCAGGCTCTTGTTGGCCGCAGAAATGGTGAAGAAACAGGTTCTGACCATGTTGAGTGCTGATCAAGGAAGAGCTGCTGAAACTGAAGAAGGAACCTCAATTGACATTTGGCACATGGACACTGCTTCCATGCACCAACTGGTTCAGAAGAAATGGGCTTCTTCCAAGAGTTCTGTTTTCATTGGAAAGTGGAACCAAGACTTTGTCAAAAGAAGGGAGCTAAAGAGAGGGCACAAGATTGGATTCTACTGGGATCCTTATTATTCCATTTTCAACTACTCTGTTCTCGAACGGGCAATGGCAACTTA 518 0.4498 MNCPGNEREQLLSNKRKCPNCEASGISTRRFCKNTYFEEEKHEGVSTTLKLYEDPWKIKKTLTASDLGVLSRLLLAAEMVKKQVLTMLSADQGRAAETEEGTSIDIWHMDTASMHQLVQKKWASSKSSVFIGKWNQDFVKRRELKRGHKIGFYWDPYYSIFNYSVLERAMAT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01360 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 168 - -
Bva04g01360 172 Gene3D - 54 168 IPR015300 -
Bva04g01360 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 168 - -
Bva04g01360 172 SUPERFAMILY DNA-binding pseudobarrel domain 55 158 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01360 Bva-Chr4 12362569 12363280 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01360 58 153 RAV Transcription Factor Family AT1G50680 33.000 2.69e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01360 - - pvu:PHAVU_009G204600g 229.95