Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01358 ATGAACTGTCCAGGAAATGAAAGAGAGCAACTGTTATCCAATAAGAGGAAATGTCCCAACTGTGAAGCCTCAGGGATTTCGACGAGAAGATTCTTCAAGAACACATATTTTGAAGAAGAGAAGCATGAGGGTGTTTCCACGACACTGAAGCTTTATGAGGACCCATGGAAGATCAAGAAGACGCTGACCGACAGCGATTTGGGAGTCTTGAGCAGGCTCTTGTTGGCCGTAGAAGTGGTGAAGAAACAGGTTCTGCCCATGTTGAGCGCTGATCAAGCAAGAGCTGCTGAAACTGAAGAAGGAACCCCAATTGACATTTGGGACATGGACACTGCTTCCATGCACCAACTGGTTCTGAAGAAATGGGCTTCCTCCAAGAGTTCTGTTTTCATTGGAAAGTGGAACCAAGACTTCGTCAAAAGAAGGGAGCTAAAGAGAGGGGACAAGATTGGCTTCTACTGGGATCCTTATTATTCCGTTTTCAACTTCTCTGTTATCGAAAGGGCAATGGCAACTTA 518 0.4537 MNCPGNEREQLLSNKRKCPNCEASGISTRRFFKNTYFEEEKHEGVSTTLKLYEDPWKIKKTLTDSDLGVLSRLLLAVEVVKKQVLPMLSADQARAAETEEGTPIDIWDMDTASMHQLVLKKWASSKSSVFIGKWNQDFVKRRELKRGDKIGFYWDPYYSVFNFSVIERAMAT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01358 172 CDD B3_DNA 56 166 IPR003340 GO:0003677
Bva04g01358 172 Gene3D - 54 169 IPR015300 -
Bva04g01358 172 SUPERFAMILY DNA-binding pseudobarrel domain 55 158 IPR015300 -
Bva04g01358 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 168 - -
Bva04g01358 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 9 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01358 Bva-Chr4 12314142 12314849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01358 58 153 RAV Transcription Factor Family AT1G50680 37.864 3.00e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01358 - - pvu:PHAVU_009G204600g 243.817