Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01345 atggggATAGCAGTAATGGCGGGTGGTGATCCTCTCAGTGAAAAAGCAGCCATGTTCAGAGAGTCGCTTCAGAAAAGCCAGACTATCACAGACAGCGTGGTTTCGATTCTTGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCAACTCAGATTCGGACTCATTCGATCCGGAAAGCTCATGAGAATATTGATAAGACGTTGAAGGCTGCAGAGGGCATATTGGCTCACTTCGATCAGTATCGTCAGGCAGAAGCAAAAATACTCAAAGGTCCTCATGAAGACTTGGAGAGCTATCTTGAAGCAATTGATCAGCTGAGAAGTAATATTGAGTTTTTTTCTAGTAGCAAGGACTTTAAGACCGGAGATGGTATTGTCAGCCATGCCAATAATTTGCTAGTTAAAGCTATTTCAAAGCTAGAAGATGAATTTAAGCAGCTGTTAGCATTATACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGATTGCCTCCCAAACTCAATGCGGCCATCTTCTGGATCACCTGGCCATGAGGGTGACTCTGGTGGCAGGCATCCTTCTTCCCATAACCATTCTGATCCAAGTAATAACACAGATGCAGTTGTATATACGCCTCCCACACTTATACCACCAAGGATTCTTCCGCTGCTTCATGATCTAACCCAGCAAATGGTTCAAGCTGGTCACCAGCAGCAGTTACTCAAAATTTACAGGGATACACGATCGAGTGTATTGGAGGAAAGCCTTCACAAACTAGGAGTTGAGAAACTCAGCAAAGATGATGTTCAAAAACTACAATGGGAGGTTTTGGAGGCCAAAATTGGGAACTGGATCCATTTCATGCGTATAGCTGTCAAATTGTTGTTTGCTGGAGAGAGAAAAGTTTGTGATCAAATATTTGAAGGCTTTGATTCACTTGGTGACCAGTGTTTTTCTGAGGTGACCCGAAGCAGTGTCTTCATGCTACTTAGCTTTGGAGAAGCAATTGCTAGAAGCAAAAGATCACCAGAAAAGTTATTTGTACTTTTGGATATGTATGAAATAATGCAAGAGCTTCACTCAGAGATTGAAACAATCTTCAAAGGTAAAACCTGCAATGAAATAAGGGAAGCTGCACTGGGTTTGACAAAACGGCTTGCACAAACAGCACAGGAGACGTTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCCACAAAAACTGCTGTAACAGATGGGACTGTCCATCCTTTGACAAGCTACgtaattaattatgtgaaGTTTTTATTTGATTACCGTTCTACCTTGAAGCAACTTTTCCAAGAAATCGAAGGTGGAGATGACGCGGCGCAGCTAGCCTCTGTTACAATGCGAATAATGCAGGCTCTGCAAACCAATTTGGATGGGAAATCAAAGCAGTATAAAGACCCTGCTCTGACACATTTATTTCTCATGAACAATATTCATTATATCGTCCGATCTGTACGGAGGTCTGAAGCTAAGGATTTATTGGGTGATGATTGGGTACAACGACATAGGAGGGTTGTGCAGCAGCATGCGAATCAATACAAAAGAAATGCCTGGGCAAAGATTCTTCAATGTTTGTCCATCCAGGGTCTTACCTCATCTGGTGGTAGTGGCAGCACAGTTGGCGGTGATGGAGGAAGTAGTAGTGGTGCTTCAAGAGCAATTGTCAAAGAAAGGTTCAAGGGATTCAATCTGACGTTTGAGGAACTTCATCAGAAACAATCTCAATGGACTGTTCCTGACACAGAGTTGCGAGAGTCTCTTAGGCTTGCAGTTGCTGAAGTTCTCTTGCCTGCTTATAGATCATTTGTGAAACGTTTCGGGCCTCTAGTAGAGAACGGAAAGACTCCTCAGAAGTACATCAAATACACTGCAGAAGACCTAGAGCGTATGCTAGGTGAATTTTTTGAAGGAAAGAATGTGAATGAAATCAAGCGGTG 1958 0.429 MGIAVMAGGDPLSEKAAMFRESLQKSQTITDSVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEGILAHFDQYRQAEAKILKGPHEDLESYLEAIDQLRSNIEFFSSSKDFKTGDGIVSHANNLLVKAISKLEDEFKQLLALYSKPVEPERLFDCLPNSMRPSSGSPGHEGDSGGRHPSSHNHSDPSNNTDAVVYTPPTLIPPRILPLLHDLTQQMVQAGHQQQLLKIYRDTRSSVLEESLHKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLGDQCFSEVTRSSVFMLLSFGEAIARSKRSPEKLFVLLDMYEIMQELHSEIETIFKGKTCNEIREAALGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEIEGGDDAAQLASVTMRIMQALQTNLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRVVQQHANQYKRNAWAKILQCLSIQGLTSSGGSGSTVGGDGGSSSGASRAIVKERFKGFNLTFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVENGKTPQKYIKYTAEDLERMLGEFFEGKNVNEIKR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01345 652 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 648 - -
Bva04g01345 652 Pfam Exo70 exocyst complex subunit 280 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva04g01345 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 648 IPR004140 GO:0000145|GO:0006887
Bva04g01345 652 Gene3D Exocyst complex component Exo70 77 181 - -
Bva04g01345 652 Gene3D Exocyst complex component Exo70 187 652 - -
Bva04g01345 652 SUPERFAMILY Cullin repeat-like 78 643 IPR016159 -
Bva04g01345 652 MobiDBLite consensus disorder prediction 166 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01345 Bva-Chr4 11860891 11885477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01345 3 652 EXO70 exocyst subunit family AT5G03540 74.594 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01345 K07195 - gmx:100813987 1072