Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01319 ATGATGATGGGTTTAGTTTCAGTGGTTCTCGGAGGTCTGCTTGTGttgttgtttcatttttccaaCTTACTGTTTGAGAAGCCAAGATTAATCAGAGCAAAGCTTCGAAGGCAAGGGATTAATGGGCCTTGTCCTCACTTCTTCTTGGGCAATATCCCAGAAATTAAGAGCATTCGGCGCCAACTTCAATCATCGTTAAAAGAAACTTCCCAAGAGAAAGATAGCTCTATTTCTCATCGCTGGCCTTCCTCTCTGTTCCCTCATATGGAGAAGTGGAGAGAGCAATATGGATCTATTTGCTTGTATTCTACTGGGAGTATACACTGGTTGCTGGTTACAGACATAGAGATGGTGAAGGAAGTCAGCCTATGTACCTCTTTGAATCTAGGGAAGCCTTCTTACCTGTTCAAAAGTTATGGCCCACTCTTTGGGCAGGGTATATTATCATCAAGTGGGCCAATTTGGGCTCACCAAAGAAAGATTATTGCTCCTGAACTATACCTTCATAAGGTGAAGGGCATGGTCAATGTGATAGTTGACTCCACCAATATAATGTTGAGGTCTTGGGAGACTAGACTTGAAAGTGAGGGAGGAACAGTTTCAGACATGAAAATTGATGAAGATTTGAGGAGCTTGTCAGCAGACATTATTGCAAGGGCTTGTTTTGGGAGCAACTATactgaaggaaaagaaatattcacAAAGCTTAGAGATCTTCAAAAAGTCATATCCAAGATAACTGCTGGAATTCCTGGCTTTCGATACTTGccattcaaaattaataaagacaTGTGGAGATTAGAGAAGGAGATAAACTCAACAATATCAAAGCTAGTGAAACGCCGCCTCGAGGCTGCTCGGGAGAAGGACCTTTTACAAATGATACTTGAGGGTGCAAACAGTTACGAGGGCAGTGATGGTCTTGCTTCAAATCCCATCTCGaatgaaaaattcataatagaTAACTGCAAGAATATATTCTTTGCTGGACATGAGACCACAGCCATTACAGCATCATGGTGCTTGATGTTATTAGCTGCACATCAAGATTGGCAAGATCGTGCCCGTGCTGAGGTATTTGAAGTTTGTGGTAATGGCCCTCCAGATGCAAGTGTACTCGGAAACATGAAGACGTTAACCATGGTGATTCAAGAGACATTGCGACTTTACCCACCAGCAGTATTTGTGATTAGAACAGCCCTCAAAGATATCATATTCAAAGACCTTCAAATTCCAGAAGGAATGAACATTCAGATTCCAATCCATGTGTTGCAGCAAGACCCGCATCTCTGGGGACCTGATGCACACAAGTTCAAACCAGAAAGATTTGCAAATGGGATTCTTGGTTCATGCAAGGCTCCACAGGCTTATATACCATTTGGGGTTGGGGCTCGTGTCTGTGTTGGCCAACAATTAGCCCAGACAGAACTCAAGGTGATTTTATCTCTCATTCTGATGAAGTTTCACTTCTCTCTCTCATCAAGTTACCTACATTCACCCAGTTTTGGATTGGTTATAGAACCAGGATATGAAACtggttttattttgatgaagaaGGGTTTTATGCTGTA 1571 0.4023 MMMGLVSVVLGGLLVLLFHFSNLLFEKPRLIRAKLRRQGINGPCPHFFLGNIPEIKSIRRQLQSSLKETSQEKDSSISHRWPSSLFPHMEKWREQYGSICLYSTGSIHWLLVTDIEMVKEVSLCTSLNLGKPSYLFKSYGPLFGQGILSSSGPIWAHQRKIIAPELYLHKVKGMVNVIVDSTNIMLRSWETRLESEGGTVSDMKIDEDLRSLSADIIARACFGSNYTEGKEIFTKLRDLQKVISKITAGIPGFRYLPFKINKDMWRLEKEINSTISKLVKRRLEAAREKDLLQMILEGANSYEGSDGLASNPISNEKFIIDNCKNIFFAGHETTAITASWCLMLLAAHQDWQDRARAEVFEVCGNGPPDASVLGNMKTLTMVIQETLRLYPPAVFVIRTALKDIIFKDLQIPEGMNIQIPIHVLQQDPHLWGPDAHKFKPERFANGILGSCKAPQAYIPFGVGARVCVGQQLAQTELKVILSLILMKFHFSLSSSYLHSPSFGLVIEPGYETGFILMKKGFML 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01319 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Bva04g01319 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 512 - -
Bva04g01319 523 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS P450 superfamily signature 329 346 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 512 - -
Bva04g01319 523 Gene3D Cytochrome P450 30 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 SUPERFAMILY Cytochrome P450 80 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 318 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 338 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01319 523 Pfam Cytochrome P450 86 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01319 Bva-Chr4 10149460 10153774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01319 117 510 Cytochrome P450 AT5G24900 47.891 7.06e-131 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01319 K24544 - gmx:100780335 721.079