Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01309 ATGGCAAAGCGCTTGATTCTGAGCTTGAACCGCGTCCTAATCGAGAAAATCGTGCCTCCGTCAAAGACCAACGCCGGCATTCTCCTCCCTGAGAAGTCCTCCAAGCTCAACTCTGGGAAGGTGGTAGCGATAGGACCTGGAACTCGGGACAAAGCTGGAAACTTAATTTCGGTGGCTGTGAAAGAGGGCGACACCGTCCTGTTGCCAGAATACGGTGGTACCGAAGTCAAGCTTGGTGATAAGGAGGGATGTAAAGTTGGAGGTTTCGAGCGACTGTGCCCGGCAGTATTACCCCACCTCCAGAAAGGGGTCCGTCCTGGCAAACTGCGTCTCAGTCTTCTGCTTCCACTTTTTGTTGGTGCTTCTGCGACTCTGGTGGGTTCACACTTTGGTCAGTTATGTCTTTCCACTGCTTTCTTATCTTTGGGTTCCTGCATTATTCTCACTCGCATCTGTCCCATTGGTCGGTGTTCTACATTTCAGATTTGTGTCCTTGGAATTGGTAGTGATTGTTTTCATTCTTG 524 0.5 MAKRLILSLNRVLIEKIVPPSKTNAGILLPEKSSKLNSGKVVAIGPGTRDKAGNLISVAVKEGDTVLLPEYGGTEVKLGDKEGCKVGGFERLCPAVLPHLQKGVRPGKLRLSLLLPLFVGASATLVGSHFGQLCLSTAFLSLGSCIILTRICPIGRCSTFQICVLGIGSDCFHS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01309 174 SUPERFAMILY GroES-like 8 82 IPR011032 -
Bva04g01309 174 Pfam Chaperonin 10 Kd subunit 10 82 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g01309 174 Gene3D GroES chaperonin 2 86 IPR037124 GO:0006457
Bva04g01309 174 PANTHER GROES-LIKE FAMILY PROTEIN 1 82 - -
Bva04g01309 174 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 82 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g01309 174 CDD cpn10 10 82 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g01309 174 SMART Cpn10_2 4 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g01309 174 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bva04g01309 174 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01309 Bva-Chr4 9917302 9920405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01309 10 80 Calmodulin-binding Proteins AT5G20720 37.500 1.54e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01309 K04078 - sind:105156244 142.895