Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01300 ATGACTGATTTtggtttctacttttttttggctttgaaGGCCTTAATATTAGGTGGCACAGATACCACAACTGGGACATTAACATGGGCTCTTGCCTTAATGCTCAACAACCCTAAAGTTCTAAGCAAGGCACATCATGAATTAGACACAAAAATTGGAAGGGAAAGGCTTGTGATGGAATCAGACTTGACCAAGCTTGAGTACCTTGACGCTATCCTCAAGGAAACGCTGCGTTTATACCCAGCAGCACCACTTAGCGTACCACATGAATCCATGGAAGATTGTGTTGTTGGTGGCTACCATATACCTGCTGGCACACGCCTCTTAACTAACATTTCAAAACTTCATAGAGATCCACGGGTGTATTCGGATCCAACCTTGTTTCGTCCCGAGAGATTCATAGAAGAGCACAAGGGTTTGGGCATGAAGGGCCAGAATTTCGAGTTGATTCCATTTGGTGCAGGCCGAAGAATGTGCCCTGGATTCTCCTTTGCTGTCCAATCTGTGCAACTGATACTTGCTAATCTGCTGCATGGGTTTCATGTTGTAAACCCTCATAATGAGCCAATTGATATGAGTGAACAGGTAGGGATTACCAACATCAAAGCCTCCCCACTCCAAGTCCTTCTTAAGCCACGTCTGTCAAGTAAAGTTTATGGATA 662 0.429 MTDFGFYFFLALKALILGGTDTTTGTLTWALALMLNNPKVLSKAHHELDTKIGRERLVMESDLTKLEYLDAILKETLRLYPAAPLSVPHESMEDCVVGGYHIPAGTRLLTNISKLHRDPRVYSDPTLFRPERFIEEHKGLGMKGQNFELIPFGAGRRMCPGFSFAVQSVQLILANLLHGFHVVNPHNEPIDMSEQVGITNIKASPLQVLLKPRLSSKVYG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01300 220 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 152 161 IPR017972 GO:0005506|GO:0016705
Bva04g01300 220 SUPERFAMILY Cytochrome P450 13 213 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 Pfam Cytochrome P450 15 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS P450 superfamily signature 18 35 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS P450 superfamily signature 150 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS P450 superfamily signature 159 170 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS P450 superfamily signature 71 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PANTHER CYTOCHROME P450 14 219 - -
Bva04g01300 220 Gene3D Cytochrome P450 10 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PANTHER CYTOCHROME P450 82C3-RELATED 14 219 - -
Bva04g01300 220 PRINTS E-class P450 group I signature 70 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS E-class P450 group I signature 27 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS E-class P450 group I signature 111 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS E-class P450 group I signature 7 24 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS E-class P450 group I signature 159 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01300 220 PRINTS E-class P450 group I signature 149 159 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01300 Bva-Chr4 9764429 9765091 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01300 14 219 Cytochrome P450 AT4G31940 55.556 4.93e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01300 - - zju:107420297 283.108