Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01293 ATGGATGCACTTCTTTCAGTTGTTGATGAAGATCAATTGCTTGAAGCTGGTCATGATGTTGACACTACAATTAAAGCTACATGCATCGCCTTAATATTAGCTGGAACAGAGACCACAACTGGGACATTGACATGGGCTCTTGCCTTAATGCTCAACAACCCTCAAGTTCTAAGCAAGGCACAACATGAATTAGACACAAAAATTGGAAGGGAAAGGCTTGCGACTGAATCAGACTTGACGAAACTCGAGTACCTTGATGCTATCCTCAAGGAAACGCTGCGTTTATACCCACCAGCACCACTTAACCTACCACATGAATCCATGGAAGACTGCACGGTTGGTGGCTACCATATACCTGCTGGCACACGCCTCTTAACTAACATTTCAAAACTTCACAGAGATCCACGGGTGTATTCTGATCCAACCTTGTTTCGCCCCGAGAGATTCCTAGAAGAGCATAAGGGTTTGGGCATGAAGGGCCAGAATTTTGAGTTCATTCCATTTGGTGCAGGCCGAAGAATGTGCCCTGGACTCTCCTTTGCTCTCCAATCTATGCAACTGATACTTGCTAATCTGCTGCATGCGTTTCATGTTGTAAACCCTCGTAATGGGCCTGTAGATATGAGTGAAGAGGTAGGGATTACCAACATCAAAGCCTCCCCACTCCAAGTCCTTCTTAAGTCACGTCTGTCAAGTCTAGTTTATGGATA 710 0.4507 MDALLSVVDEDQLLEAGHDVDTTIKATCIALILAGTETTTGTLTWALALMLNNPQVLSKAQHELDTKIGRERLATESDLTKLEYLDAILKETLRLYPPAPLNLPHESMEDCTVGGYHIPAGTRLLTNISKLHRDPRVYSDPTLFRPERFLEEHKGLGMKGQNFEFIPFGAGRRMCPGLSFALQSMQLILANLLHAFHVVNPRNGPVDMSEEVGITNIKASPLQVLLKSRLSSLVYG 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01293 236 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 168 177 IPR017972 GO:0005506|GO:0016705
Bva04g01293 236 Gene3D Cytochrome P450 1 232 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 23 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 127 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 86 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 43 69 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 165 175 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS E-class P450 group I signature 175 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 SUPERFAMILY Cytochrome P450 1 229 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PANTHER CYTOCHROME P450 82C3-RELATED 1 235 - -
Bva04g01293 236 Pfam Cytochrome P450 21 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS P450 superfamily signature 34 51 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS P450 superfamily signature 166 175 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PRINTS P450 superfamily signature 175 186 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bva04g01293 236 PANTHER CYTOCHROME P450 1 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01293 Bva-Chr4 9607565 9610307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01293 1 235 Cytochrome P450 AT4G31940 50.847 4.58e-85 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01293 - K23136 gmx:100787630 311.612