Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01243 ATGCTTGTCGTAAAGGAGGAAATTCTGGGAAGGGGATCTTCTGCCACTGTCTTCCGGGCAGTTTCCCACGGCAGTCGCGTCACAGTGGCCGTGAAGGCCACCTCGTACCTGCATTGCGTTCTTTCATTACAGAAAGAGGAACACATCCTCAACACTTTCCGGGGATGTCCCGAGATTGTCCAGTGCTATGGGAGCCAGATTACCGTAGAGAACGGCGTGTCTGTCCACAACCTTTTCTTGGAGTATGCCCTTCATGGCACTCTCTTAGATTTGATCAAGAAAGGGGCTTTTCTTGAGAGCCAAGTAAGAGACTTCACCCGCATGCTGCTCAGAGGCCTTTCTCGCATTCATCGCATGGGTTTAGTTCATTGTGATCTTAAACCCGAGAACATTCTTGTTTTTCCGGGGACTGAAACGGCCACGTCTTATCAGTTGAAGATCGCTGACTTTGGACTGTCACTGACCTTAGAAGAGAAGCGGAAGCTCGACTGCCGTCGTTGGAGGGGTAGGTTCAAAGGAACTCCGTTGTACATGTCACCAGAGTCGGTGGTCGCTGGGGAGATCGGACCGGCGTTGGATATATGGTCGCTTGGCTGCACAGTGGTTCAGATGATCACTGGTTTACCTCCATGGACATTGTGGGACTCTGGCTTGCAGATAAAGACAACGAGGGAGGTCATGTGTATGCTTCTGTTTGATGAGAATGCAGCGCCCAAGGTACCTGAAGGAGTGAGCAAGGACTGCAGGGATTTTCTGAGCAAGTGCTTCGATAGAAATTCAAAGTGGAGATGGACGGCTGATATGCTGCTACTGCACCCTTTTCTTGCACCTCCTAGGAGTTCGAAAGATTTCAATCAATACATGGCCTCCGTTTTACAATGTTCTTA 887 0.4983 MLVVKEEILGRGSSATVFRAVSHGSRVTVAVKATSYLHCVLSLQKEEHILNTFRGCPEIVQCYGSQITVENGVSVHNLFLEYALHGTLLDLIKKGAFLESQVRDFTRMLLRGLSRIHRMGLVHCDLKPENILVFPGTETATSYQLKIADFGLSLTLEEKRKLDCRRWRGRFKGTPLYMSPESVVAGEIGPALDIWSLGCTVVQMITGLPPWTLWDSGLQIKTTREVMCMLLFDENAAPKVPEGVSKDCRDFLSKCFDRNSKWRWTADMLLLHPFLAPPRSSKDFNQYMASVLQCS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01243 295 Pfam Protein kinase domain 5 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01243 295 ProSiteProfiles Protein kinase domain profile. 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01243 295 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 286 - -
Bva04g01243 295 SUPERFAMILY Protein kinase-like (PK-like) 6 284 IPR011009 -
Bva04g01243 295 SMART serkin_6 3 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01243 295 Gene3D Transferase(Phosphotransferase) domain 1 3 293 - -
Bva04g01243 295 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bva04g01243 295 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 286 - -
Bva04g01243 295 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01243 Bva-Chr4 8753904 8754791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01243 1 286 MAP Kinase Kinase Kinase AT4G36950 40.339 1.54e-62 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bva04g01243 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01243 - - gmx:102664043 261.922