Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01230 ATGGGGAAAGCTTCACTCGATTTCAGAGCTCGATTACTACTCTGTAGCTTGATAAGTTTCTGTTTCCCGGGTTTTGCTGTTTCGCAGACTGAAGATGATGTGAGATGCCTCAGAGGACTGAAAGAATCGCTGGAAGATCCTCAGGACAAGCTTCTTTCATGGCGATTCGATAATACAACCTCGGGATTCATCTGCGGTTTCAACGGAGTGATGTGCTGGAACAGCAAGGAGAACCGGATCATCCAATTGCAGCTCAAGGAAATGAATCTCTCTGGCCAGTTGCCAGAGTCATTGAAGTACTGTGGGAGTCTTCAGAAACTGGAGCTTGATTCGAACGACTTGTCGGGTACGGTCCCTTCTGAGATTTGTAGTTGGTTGCCATATTTAGTGACACTGGATTTGTCGAATAATGGTCTCTCTGGGCCTATTCCCCCTGGCCTTGTGAATTGTACCTATTTGAATGACTTAATCCTTTCGAACAATCAGCTTTATGGTGCCATTCCTGATGGATTTGGGAGTTTGAGTAGGCTTAAGAGGTTTTCTGTTGCTAATAATCAACTTACTGGTCCTATTCCTTCGTTTTTCAATAGATTTACTAAGGAAGACTTTATTGGGAATAGTGGTCTTTGTGGGGGTCCTCTTGGATCAAAGTGTGGTGGGTTGAGTAAGAAGAATCTTGCTATTATTATTGCTGCTGGGGCGTTTGGTGCAGTTGCTTCTCTGTTTTTGGCTTTTGAATTGTGGTGGTGGTACCATTTGAGGTtgatgaagaggaagaagagagggTATGAGGATGGACCAGATGATGGTTGGGTTGTGAGGTTGAGGGATCACAAACTTGTACAAGTTATCCTTTTTCAGAAACCTCTTGTGAAGCTTAAGTTAGGGAATTTGATGGCAGCTACCAATAATTTCAGtgcagaaaatattattatttcctcAAGAACAGGTACTACATATAAAGCAGATCTTCCTGATGGGTCAACACTTGCTGTCAAGAGGCTGAATACCTGCAAGATTGGTGAGAAGCAGTTCCGAATGGAGATGAGTAGGCTAGGCCAAGTCCGGCACCCGAATTTTGCGCCCCTTTTAGGGTTTTGTGTTGTGGAAGAGGAAAAGCTTGCGATTTATAAGCACATGTCAAATGGGACTCTGTATTCCTTGTTGCATAAAAATGGTAGTGCATTGGATTGGGGAACAAGATTCAAGTTAGGCCTGGGTGCAGCTAGAGGTCTTGCTTGGTTGCATCATGGGTGTCAGCCTCCAATTATACACCAAAACATCTGCTCCTATGTGATACTTGTTGATGAAGATTTTGATGCCCGGTTAATggactttggtctttctagaCTTATGACATCTGAAACTAGTGGAAGTAATTTTGTGTATGGGGACTTGGGGGAACTTGGCTATGTAGCACCAGAATATCCACGAACCCAGGTTGCTTCACTAAAAGGGGACGCATATGCATTTGGGGTTGTGCTTTTGGAGTTGGTCACCAGCCGAAAACCTCTTGAAGTCAGCAATGGAGAGGAAGAATTGAAGGGAAAGCTTGTGGATTGGGTGAATATGCTTTCAATTTCTGGTCGAATAAAGGATTGCATTGATAAGGACATTTGCGGAAGGGGAGATGATGAGGAGATTTTGCAGTTTCTGAAAATTGCACTTCACTGTGTGGCTTCTCGTCCCAAAGATAGGTGGTCTATGTACCAAGTTTATCACTCATTGAAGAGTATGTCCAGAGGCCACAGTTTCTCCGAAGATGGCGATGAGTTCCCGCTGATCTTTGGTGATCCAGATAACGAGCAGCGTAGTTCTGAAGCAAGAACTGTTGTGCAGCACGACAAAGATATGTA 1856 0.4256 MGKASLDFRARLLLCSLISFCFPGFAVSQTEDDVRCLRGLKESLEDPQDKLLSWRFDNTTSGFICGFNGVMCWNSKENRIIQLQLKEMNLSGQLPESLKYCGSLQKLELDSNDLSGTVPSEICSWLPYLVTLDLSNNGLSGPIPPGLVNCTYLNDLILSNNQLYGAIPDGFGSLSRLKRFSVANNQLTGPIPSFFNRFTKEDFIGNSGLCGGPLGSKCGGLSKKNLAIIIAAGAFGAVASLFLAFELWWWYHLRLMKRKKRGYEDGPDDGWVVRLRDHKLVQVILFQKPLVKLKLGNLMAATNNFSAENIIISSRTGTTYKADLPDGSTLAVKRLNTCKIGEKQFRMEMSRLGQVRHPNFAPLLGFCVVEEEKLAIYKHMSNGTLYSLLHKNGSALDWGTRFKLGLGAARGLAWLHHGCQPPIIHQNICSYVILVDEDFDARLMDFGLSRLMTSETSGSNFVYGDLGELGYVAPEYPRTQVASLKGDAYAFGVVLLELVTSRKPLEVSNGEEELKGKLVDWVNMLSISGRIKDCIDKDICGRGDDEEILQFLKIALHCVASRPKDRWSMYQVYHSLKSMSRGHSFSEDGDEFPLIFGDPDNEQRSSEARTVVQHDKDM 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01230 618 Pfam Protein kinase domain 316 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01230 618 Gene3D Phosphorylase Kinase; domain 1 268 379 - -
Bva04g01230 618 Gene3D Transferase(Phosphotransferase) domain 1 380 593 - -
Bva04g01230 618 SUPERFAMILY L domain-like 30 201 - -
Bva04g01230 618 Gene3D Ribonuclease Inhibitor 30 219 IPR032675 -
Bva04g01230 618 PANTHER - 14 598 - -
Bva04g01230 618 PANTHER OS07G0107800 PROTEIN-RELATED 14 598 - -
Bva04g01230 618 ProSiteProfiles Protein kinase domain profile. 305 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01230 618 SUPERFAMILY Protein kinase-like (PK-like) 284 576 IPR011009 -
Bva04g01230 618 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Bva04g01230 618 MobiDBLite consensus disorder prediction 602 618 - -
Bva04g01230 618 MobiDBLite consensus disorder prediction 596 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01230 Bva-Chr4 8555417 8557744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01230 9 603 Receptor kinase-like Gene Family AT3G28450 62.333 0.0 775
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Bva04g01230 Pkinase 7.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01230 - - lang:109347314 859.751