Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01226 ATGGACAATCAACCCCATAATGCCGAAAATAATGACTTTGAATCTGCTATTAGCACCAGCCTCCAAGACCCAAGTGCCAGCACTAGCATTAGCCTATGCAGTAGTAGTGTGAGTAGTAGCAAGATGAGCAATAGCAATGTTGAGCGTCAAAGGAGCACTGAATCTTTGGCAGATTGTGATGCAAGTTACAAGAGTAGTTCAAGCTGTGTGAGCGTGAGTGTGAGTAATTCCAAATGTTATGATGCAAATGAAGCCAGTTTTAGGAGCTTTTGCCCTTCAAAACCCCACAAGGGCAATGATATTAGATGGGATGCCATACAATGTGTAAAGGCGAAAGATGGGGATTTGGGTTTGGGGCATTTCAGGCTCTTGAAGAAGCTTGGATTTGGGGACATTGGGAGTGTGTACTTGGCTGAGCTGAGAGGGATGGGGTGCTTGTTTGCCATGAAGGTTATGGATAAGGGCATGTTAGCTGGAAGGAAGAAATTGGCTAGAGCTCAAACTGAGAGAGATATTTTGGGCTTGTTGGACCACCCTTTCCTTCCAACCctttattctcattttgagACTGAGAAATTCTCTTGCTTGCTTATGGAGTTTTGTAGTGGTGGGGATCTACATACGCTCCGGCAACGGCAACCCGGCAAACATTTTACAGAGCAAGCAGCAAGGTTTTATGCTTCGGAAGTGCTTCTTGCACTTGAGTATCTACACATGATGGGAGTGGTATACAGAGATTTAAAACCTGAAAATGTACTGGTGAGGGAAGATGGGCATATCATGCTTTCTGATTTCGATTTATCACTAAGATGTTGTGTGAGTCCCACCCTTGTTCAGTCCATTAAAGAACCAGCTTGTCAGATGTCTTCTTACTGTATTCAGCCAGCATGTATTGATCCTACCTGCAAATTGCCAGTTTGTGTGGAGCCTTCATGTTTGCAGCCCACTTGCTTGAGGCCCCATCTATTTAAATCCAAAAAAtccaaagggaaaaaaagtgaaaggTTAAGCTTAGCCAATTCAGATTCACTCCCTGTACTTGTTGCTGAGCCGACAAATGCCCGGTCCATGTCATTTGTTGGGACTCATGAATACTTGGCTCCTGAGATTATTAGAGGTGATGGTCATGGAAGTGCTGTGGATTGGTGGACATTTGGTATTTTCTTGTATGAGCTACTAGTTGGTAGAACGCCATTTAAAGGCAATGGAAACCGCGAAACCTTGTTCAATGTTGTTGGTCAGCCTCTGAAATTTCCTGAGGGATCAAGCATCAGTTTTGCTGCAAAGGATTTGATAAGGGGATTGCTAGTTAAAGACCCACAAAAGAGGTTTGGATACAAAAGGGGCGCCACAGAGATCAAACAGCACCCGTTCTTTGAAAGCATTAATTGGGCTCTCATTCGCAGCATCCATCCCCCGGAGATTCCAAAACCTGTTGATGTTGCATTATTGAATCATACATTCAAATCATCAGTGCCTCCTAAAGACAACAAAGGTGCTACTGATTCAGATAGGTCTTCTGGTCCTTACTTggattttgaattctttta 1550 0.4232 MDNQPHNAENNDFESAISTSLQDPSASTSISLCSSSVSSSKMSNSNVERQRSTESLADCDASYKSSSSCVSVSVSNSKCYDANEASFRSFCPSKPHKGNDIRWDAIQCVKAKDGDLGLGHFRLLKKLGFGDIGSVYLAELRGMGCLFAMKVMDKGMLAGRKKLARAQTERDILGLLDHPFLPTLYSHFETEKFSCLLMEFCSGGDLHTLRQRQPGKHFTEQAARFYASEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVSPTLVQSIKEPACQMSSYCIQPACIDPTCKLPVCVEPSCLQPTCLRPHLFKSKKSKGKKSERLSLANSDSLPVLVAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLVGRTPFKGNGNRETLFNVVGQPLKFPEGSSISFAAKDLIRGLLVKDPQKRFGYKRGATEIKQHPFFESINWALIRSIHPPEIPKPVDVALLNHTFKSSVPPKDNKGATDSDRSSGPYLDFEFF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01226 516 PANTHER FLIPPASE KINASE 1-RELATED 3 516 - -
Bva04g01226 516 SMART serkin_6 121 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01226 516 Gene3D Transferase(Phosphotransferase) domain 1 201 270 - -
Bva04g01226 516 Pfam Protein kinase domain 356 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01226 516 Pfam Protein kinase domain 122 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01226 516 Gene3D Phosphorylase Kinase; domain 1 120 200 - -
Bva04g01226 516 MobiDBLite consensus disorder prediction 1 50 - -
Bva04g01226 516 MobiDBLite consensus disorder prediction 493 516 - -
Bva04g01226 516 SUPERFAMILY Protein kinase-like (PK-like) 97 489 IPR011009 -
Bva04g01226 516 PANTHER PROTEIN KINASE 3 516 - -
Bva04g01226 516 ProSiteProfiles Protein kinase domain profile. 121 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01226 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Bva04g01226 516 CDD STKc_phototropin_like 120 480 - -
Bva04g01226 516 Gene3D Transferase(Phosphotransferase) domain 1 353 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01226 Bva-Chr4 8510748 8513221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01226 20 516 AGC Kinase Gene Family AT5G40030 72.311 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bva04g01226 Pkinase 1.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01226 K08286 - jre:109008933 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01226 04 8510748 8513221 Bva04g01226 04 8510748 8513221 ECH