Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01205 ATGGCTTCAGGTGTTGATGATGTTACAATGGCTAATCTGGATGGAGAAAAATCGAAGGGAAGAAAGGACAAACATGTCCAAACTGAAACTTCAGGATGTGGGATGATATTCAAGTTTATGGGAAAGTACGTGCCTTTGAAGAGTGGTAATAGTGAACAAGATGCTGAAGGCAAATCTACAAACAATAACAGTTCAGGTCAACCAGTTGCTCCAGTTGCAACATCTTCAACAAAGAGCAATGCTGTAATTACTGCATCCACttccaataaaaatgatgaactAAAAATTGCTTCCGAGCTCCGAAGGTTCTCCTTTCATGAGCTTAAGATGGCGACAGGGAATTTTAGACCTGAATATATTCTAGGTGAGGGTGGGTTTGGTCGTGTATTCAAAGGTTGGATTGGTGAAAAGGGTACAGGAAGACCTAAACCAGTTGCAGTAAAGACTCTTGATCATGAAGGACTTCAAGGCCATAAAGAATGGCTTgctgaaattaattatcttgGCGAACTGCATCATCCAAATCTAGTTAAATTGATAGGTTACTGCATCGAAGACGAGCAAAGGCTTTTAGTATATGAGTTCATGGCTCGAGGAAGCTTGGAAAATCACCTATTCAGAAGAAATCATAACCTTATATGGTCTGTAAGACTGAAAATCATGCTAGGTGCTGCAAATGGCCTTGCTTTTCTGCATGAGGAAGCTGCAAGACCAGTGATATTTCGAGACTTCAAAACATCAAATATCCTGTTGGATGAAGATTTCAATGCAAAACTTTCTGATTTTGGTCTTGCCAAAGACGGTCCAGTGGGAGACTCCACTCATGTGTCTACTCGAATTTTGGGAACACAGGGTTATGCAGCGCCTGAGTATTTCATGACAGGACATCTTAGTACCAAGAGTGATGTCTATAGCTTTGGAATAGTGCTTCTTGAAATGTTGACTGGAAGAAAAGCCATAGACCGAAGCCGGCCTGATGGGGAGCGTAAGTTGGTGGAATGGTGCCGCCCGCGTATTGGGGATGGAAGAAATCCCTTTCTACTGATGGATCCTCGGCTTCAAGGTATTTTCTCAATGAAAGGTGCTAGGAAAGCTCTTGTGTTGGCTACTCACTGCCTTCAACGTGACCCGAAAGCAAGGCCTCAGATGAGTGAAGTTGTTGCAAAGCTGACTCCATTGCTTTACCTCAATGACTTGGCTTCTATTACACCTTTTTACCGGGCTATGGAAACTTCTAGAAATGTTCAAGAAAGTTCTAGAAATATCCAGAAAACACAATCTGGGACTTCTATTTCACCATCTTACCAAGCTATGGAAAGTTCTAGAAATATCCAAGAAAGTTCTAAAAATATTCAGAGAACACAGTCTGAGACTTCTATTTCACCCTCTTACCGGGCTAAGAAAAGTTCTAGAAATGTTCAGAGAACACAGTCTGAGGCTTCTATTTCACCCTCTTACCAAGCTATGGAAAGTTCTAGAAATATTCAGGAAAGTTCTAGAAATGTTCAGAGAGAACAGTCTGGGGTTTCTCTTTCACCTTCTTACCAAGCTGTAGAAAGTTATAGAAATGGCCAGAGAACACAGTCTGAATCCTCAAAAACCCCTTTAAGGACACCATCTAGGACACCACCAAAGAGTCCAACTATTTCACCCGCTTATTGGACTATGGAAAGTTCTAGAAATATCCAGATAACACAAGTTGGGTCTTCAAGAACCCCTTCAAGGACACCATCGAGGACGCCACCAAGGAGTCCAAATCGCAGGCAAGCCTCATCATTTTGCGCCAACCATCCTCCATTTCGGTG 1805 0.415 MASGVDDVTMANLDGEKSKGRKDKHVQTETSGCGMIFKFMGKYVPLKSGNSEQDAEGKSTNNNSSGQPVAPVATSSTKSNAVITASTSNKNDELKIASELRRFSFHELKMATGNFRPEYILGEGGFGRVFKGWIGEKGTGRPKPVAVKTLDHEGLQGHKEWLAEINYLGELHHPNLVKLIGYCIEDEQRLLVYEFMARGSLENHLFRRNHNLIWSVRLKIMLGAANGLAFLHEEAARPVIFRDFKTSNILLDEDFNAKLSDFGLAKDGPVGDSTHVSTRILGTQGYAAPEYFMTGHLSTKSDVYSFGIVLLEMLTGRKAIDRSRPDGERKLVEWCRPRIGDGRNPFLLMDPRLQGIFSMKGARKALVLATHCLQRDPKARPQMSEVVAKLTPLLYLNDLASITPFYRAMETSRNVQESSRNIQKTQSGTSISPSYQAMESSRNIQESSKNIQRTQSETSISPSYRAKKSSRNVQRTQSEASISPSYQAMESSRNIQESSRNVQREQSGVSLSPSYQAVESYRNGQRTQSESSKTPLRTPSRTPPKSPTISPAYWTMESSRNIQITQVGSSRTPSRTPSRTPPRSPNRRQASSFCANHPPFR 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01205 601 MobiDBLite consensus disorder prediction 12 27 - -
Bva04g01205 601 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g01205 601 SUPERFAMILY Protein kinase-like (PK-like) 100 424 IPR011009 -
Bva04g01205 601 MobiDBLite consensus disorder prediction 52 81 - -
Bva04g01205 601 PANTHER TYROSINE KINASE FAMILY PROTEIN 58 450 - -
Bva04g01205 601 Pfam Protein tyrosine and serine/threonine kinase 120 319 IPR001245 GO:0004672|GO:0006468
Bva04g01205 601 ProSitePatterns Protein kinases ATP-binding region signature. 121 148 IPR017441 GO:0005524
Bva04g01205 601 CDD STKc_IRAK 121 393 - -
Bva04g01205 601 MobiDBLite consensus disorder prediction 547 593 - -
Bva04g01205 601 MobiDBLite consensus disorder prediction 48 81 - -
Bva04g01205 601 Gene3D Transferase(Phosphotransferase) domain 1 196 401 - -
Bva04g01205 601 Gene3D Phosphorylase Kinase; domain 1 95 195 - -
Bva04g01205 601 MobiDBLite consensus disorder prediction 412 601 - -
Bva04g01205 601 ProSiteProfiles Protein kinase domain profile. 115 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g01205 601 PANTHER OS01G0588500 PROTEIN-RELATED 58 450 - -
Bva04g01205 601 Coils Coil 437 457 - -
Bva04g01205 601 MobiDBLite consensus disorder prediction 412 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01205 Bva-Chr4 8260389 8266771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01205 33 406 Glycoside Hydrolase AT3G07070 47.354 1.31e-108 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva04g01205 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01205 - - ming:122086422 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01205 04 8260389 8266771 Bva06g01243 06 9566634 9569058 ECH
Bva04g01205 04 8260389 8266771 Bva05g00458 05 2259026 2261625 ECH
Bva04g01205 04 8260389 8266771 Bva04g01205 04 8260389 8266771 ECH
Bva03g01291 03 12587394 12592641 Bva04g01205 04 8260389 8266771 ECH
Bva08g01457 08 7643106 7646247 Bva04g01205 04 8260389 8266771 ECH