Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01182 ATGGCGGTCGGAATCTCCGCCGCCGTAACCTTTAAAcctttccttctcttccaATCTTGTTCAGAAACTCTCACAAAACCTGCTGCCCCCACACTACTCTTCTCCCCATTGAGATGTTTCCCTCGCCGCACAAATCGCCGAATCCGCAGAATGACGAGCACCACCGTCTGCGTTCTCATGGAGGATCCAAAACAAAGTGCCCAGATCGAAACTTCAGCAGAGGAAGCTCCCAATCAAATCAATTCCCAAGTTACATCAACTCGATCAGCTGAAAAATTGGCCAGGAAACGATCCGAGAGGTTCACTTATCTCGTAGCAGCTGTTATGTCTAGCTTTGGGATCACTTCTATGGCGGTTATGGCTGTCTATTACAGATTCTCGTGGCAAATGGAGGGTGGAGAAATTCCTTGGTCTGAAATGTTTGGCACATTTGCTCTCTCAGTGGGTGCTGCGGTGGGTATGGAGTTTTGGGCAAGATGGGCTCATAGAACTCTGTGGCATGCTTCCCTATGGCATATGCATGAGTCCCACCATCGACCCAGAGAAGGAGCATTCGAACTGAACGATGTTTTCGCCATAATAAACGCTGTCCCAGCAATCGGTCTCCTTTCCTATGGTTTTTTTCACAAGGGTCTGGTCCCTGGCCTCTGTTTTGGTGCGGGTCTTGGAATCACAGTATTTGGGATGGCCTACATGTTTGTTCACGATGGATTGGTTCATAAAAGATTCCCCGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGGGTAGCCGCTGCTCACCAACTTCACCATTCAGAGAAATTCGATGGGGTGCCGTATGGGCTGTTTATGGGACCAAAAGAAATTGAAGAAGTAGGAGGACTAGTTGAACTGGAGAAAGAGATaaataggagaaaaaaatcatattccCGTTCATG 920 0.4652 MAVGISAAVTFKPFLLFQSCSETLTKPAAPTLLFSPLRCFPRRTNRRIRRMTSTTVCVLMEDPKQSAQIETSAEEAPNQINSQVTSTRSAEKLARKRSERFTYLVAAVMSSFGITSMAVMAVYYRFSWQMEGGEIPWSEMFGTFALSVGAAVGMEFWARWAHRTLWHASLWHMHESHHRPREGAFELNDVFAIINAVPAIGLLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSEKFDGVPYGLFMGPKEIEEVGGLVELEKEINRRKKSYSRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01182 306 Pfam Fatty acid hydroxylase 150 277 IPR006694 GO:0005506|GO:0008610|GO:0016491
Bva04g01182 306 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 4 302 IPR045019 GO:0016491
Bva04g01182 306 PANTHER BETA-CAROTENE HYDROXYLASE 4 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01182 Bva-Chr4 8065021 8067872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01182 1 220 Chloroplast and Mitochondria Gene Families AT4G25700 63.717 7.01e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01182 K15746 - gmx:100813368 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01325 03 12857597 12860193 Bva04g01182 04 8065021 8067872 ECH
Bva04g01182 04 8065021 8067872 Bva04g01182 04 8065021 8067872 ECH