Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01174 ATGGCGTCGCCGGGGTTCACGGGCGGTGGAGCATCGGAGTATTTCGGCGGAGCCGGAGGATATTCTGGCCGATCCATGGCAGCAACCGCCATGAACAACCCCACTACCGGTATTAACGGCAACCTTCATCCTTCTCGTCCTTTGTACCGTACCCAGAAGCAGCTACCGGCAATTTTTCTTGATCCTTCTTCGCAGATCGCTCGACAAACACCCAGCTTAATTGGTAAGCGTACCCTTGCCGAATTTCAAAACCAGCAGAGCCATAACCATCCTCTTTCAAATCTTCTACTTCGCTCTGTAAAGCCCAGAACCTTTCAACATAATTCTCCTATGTCACCGCTTTCACCTATGGATTTTTCTATGTCCCCTGAATTGCCCAACTCTTCTGGTTTATCGACGCAGCGTTTTGGCATGCCCTTTCTTCAGCAACTCCGCCCTCAACCTCAACCCATTAATCCCCCTCTCCTAAATGGGAATTTGCCTATGAGTAATTGCAATTCAATCTTACCGAATACTAGCCTTCCCTACACAAATTCTTCTACTTTGGGTCATGTTCAGAACAGGGTTTGTCCAGTGCAGGAGCCTGAGAAGAAGTTTATAGACCATCAGCTACAGGAGCTGGAAAAACAGCTTTTGGAAGACAATGATGAGGAAGAAGGCGATACTGTTTCTGTGATTACCAACAGCGAGTGGTCAGATACTATACAGAACCTGAACCTGATTGCTCCTGGTCAAAAACCCATTTCCTCCTCACCCACTACGTCTACGACGTCGtccacttcttcttcttcatctgtaGCATCACCTGCTTCCGGCTGCTCAAGACAATCCATAATGGAGGCTGCATCTGCAATTTCCGAAGGTAAAACAGAAGCTGCTTCGGAGATCCTTGCCCGTTTGTCGCAGTTTTCAAACCCAAAAGGGAATTCGGATCAGAGATTAACAGATTGCATGGTTTCAGCTCTGAAATCGCGGCTGAATCCACTTGAACACCCACCTCCTATAGCAGAACTTTTCAGCATGGAACACGCTGACTCTATTCAGATGCTATACAACACGGCACCCTGCTTTAAGGTTGGGTTTATGGCTGCCAATCTTGCCATCCTGGAAGCCGCATTAGAGGATGCAACTGAGAATGGTACCAAACTCCATGTGGTTGATTTTGATGTCGGGCGTGGGAACCAGTACGTGAATCTCTTACACGTGCTGTCTTCGTGTCAGAACGGGAAACCAGCCACGGTGAAGATCACCGCCGTAGCGGAGAATGGTAGTGAAGAAAGGTTGAAGCTTGTGGGTGATAATCTGAAACAACGAGCAGGGCAGTACGGGATTGGGTTAGAATTCAATGTGTTGACTCAGAAACTCGCGGACCTGACTCGCGAGTCACTGGGTTGCGATCCCGACGAGCCACTGTTAGTGAATTTCGCATTCAAAATGTACAGAATGGCCGACGAGAGCGTGTCCACGGAGAACCCAAGAGACGAGCTTCTCCGGTTCGTGAAGGGGTTGGCTCCGAGGGTTGTAACGCTGGTGGAGCAAGAAATGAACATCAACACGGCGCCGTTCATGGCTCGGGTGACCGAGTCATGCTCCTATTACGGTGCTCTGTTTGACTCAATCGAGTCGATAACGCCGAGAGATAACTCGGATCGAGTGAAGGCGGAGGAAGGACTGAGTCGGAAACTCGGAAACGTGATCGCTTGCGAGGGGAGAGAACGTGTGGAAAGATGCGAAGTATTTGGCAAGTGGCGGGCCCGCATGAGCATGGCGGGGTTCCAGTTGAAACCAATGAGTCAGATCATCGCCGAGTCCATAAGGGCGCGACTCAATTCCGGCAACGTAGTCAACCCGGGTTCACCGTCAAAGAGGAGAACGGTGGGATTTGCTTCGGTTGGATGGGTCGAACTCTCACCGTCGCATCTACTTGGCGTTAACttcactcttttttattttctcctttatttttttggaattattatatatcaaaattgttactatatatttta 2006 0.4791 MASPGFTGGGASEYFGGAGGYSGRSMAATAMNNPTTGINGNLHPSRPLYRTQKQLPAIFLDPSSQIARQTPSLIGKRTLAEFQNQQSHNHPLSNLLLRSVKPRTFQHNSPMSPLSPMDFSMSPELPNSSGLSTQRFGMPFLQQLRPQPQPINPPLLNGNLPMSNCNSILPNTSLPYTNSSTLGHVQNRVCPVQEPEKKFIDHQLQELEKQLLEDNDEEEGDTVSVITNSEWSDTIQNLNLIAPGQKPISSSPTTSTTSSTSSSSSVASPASGCSRQSIMEAASAISEGKTEAASEILARLSQFSNPKGNSDQRLTDCMVSALKSRLNPLEHPPPIAELFSMEHADSIQMLYNTAPCFKVGFMAANLAILEAALEDATENGTKLHVVDFDVGRGNQYVNLLHVLSSCQNGKPATVKITAVAENGSEERLKLVGDNLKQRAGQYGIGLEFNVLTQKLADLTRESLGCDPDEPLLVNFAFKMYRMADESVSTENPRDELLRFVKGLAPRVVTLVEQEMNINTAPFMARVTESCSYYGALFDSIESITPRDNSDRVKAEEGLSRKLGNVIACEGRERVERCEVFGKWRARMSMAGFQLKPMSQIIAESIRARLNSGNVVNPGSPSKRRTVGFASVGWVELSPSHLLGVNFTLFYFLLYFFGIIIYQNCYYIF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01174 668 MobiDBLite consensus disorder prediction 243 272 - -
Bva04g01174 668 Coils Coil 197 217 - -
Bva04g01174 668 ProSiteProfiles GRAS family profile. 265 645 IPR005202 -
Bva04g01174 668 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 68 634 IPR005202 -
Bva04g01174 668 Pfam GRAS domain family 275 612 IPR005202 -
Bva04g01174 668 PANTHER SCARECROW-LIKE PROTEIN 8 68 634 IPR030013 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01174 Bva-Chr4 8003342 8005562 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01174 41 634 GRAS Transcription Factor Family AT5G52510 49.114 2.13e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva04g01174 GRAS 3e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01174 - - tcc:18605613 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01174 04 8003342 8005562 Bva04g01174 04 8003342 8005562 ECH