Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01167 ATGCCAGTTGCAAAACCTAAGGCCTCTAGCACTCCAGATGTCATGAAAGCAGAGGATGCAAATGATTCCATAGATACCATAATCAGACAAGCATTTGCCAAAGaaccctttctttctttctcaaggGCTGGTGACAGCCCTGCACAGTGGATTCAATTCCTACATGCTTTAGATCAGCCAGAACACCCAGGTTGGCCTTTGCTCTCTCCTCTGAAGGTTCAGTTACAGAAGTGTGACAAGTGTTCCCAAGAATTTTGCTCCCCAATAAACTATAGACGACACATACGTGTACATCATCGGTGGAAAAAACTTGATAAGGATTCTACGAAAAATAGGGATCTGTTAGGAGCTTATTGGGATAAGCTCTCTATTGAAGAAGGGAAGGAAGTTGTATCATTCAAGAACGTGATGCTAGAgGATGTAGAGGGTTCGTCAATTTTAAAAGCCCTGACAACCCCTATACGAAAACCTGGATTTTCAACACTTCCACAGTATTATCTAAAGGCTGGTTCTGCCCTTTTGGATATTATTCAGGCTAGAATTTCCAGGTTTATATCTTCCCAGGAGTTGTTCAGCATCCTTGATGATGCCAgtgaaaaaacatttttgtgTGGGACAGCAGAGTCaatgcaaaaatatatttttgatggAGAGGCTGGAAAGATTGGTCTTGACCCAAAAAATATAGTTGCTTCCACAAGTTTCTTGCTGGAACAGAAATTGGTCAAGGCATGGCTAGCTGATAAGGATGCTGAAGCATTGAGGTGTCAGAAGCTGCTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGGCAAGCTGAGATTTTGGAGAGGAAACGTCAGAAAAAGCTTAGACAAAAAGAACAGAAGGCAAGAGAACAAAGACACGAGGATGATGCAGAAATTAGGGACAATAACAGCAGCACTGGAGAGACTGTATCATCAGCTGTAGAATCTTCAGAAGCATGTAACAATGGAGCACATAACACTGATACATTTCCAGATCACATTCTCTCTTCTGTTGCACCCTTCCCTAACATTAATGGTGGTGTTAATGGGGAGTGTCAGTCGAGTTATGGTTGTGAATTTACTGATCTAAGCACTGACCATAACATTGAGCGACGGACTGCACAAGGGCATAACCGCCAACGCATGGCTGCTACTCGATGGCAGGTGCTGCCAAAATCACAATGGGCTGCACCCAACGGTTTCCACACAATCCAGAATCAAAAGCTTGGAGTCACTCAGAAACAAGGAACTCACCGTGATCAAAGGGCAGCTCCAATAGTAAATGGTAATAAAGTATGGACCCGAAAACCTAAACCAGAAACTGATGGGGTGATTTTGAAAGCCAGACCACAGAATGAACCAGAACAAGTGAAGAGCCATGAAGTTTTGATTGGGTCTATATCTGTTACTCTTGGCAATTGCAGCCAATCTGAGGGTGAGGGTAATCTGGGGGCATCATCTCAGGAGGACTGCACGGTAGACAATCTGGCCAAGCTGAATGGTGTTCAGGAAAAGCCAATTCAGCATGATTCCAACCAGAGTGGCAACAATCGGTTAATAGTTAAGCTTTGGAGGCCGGTTAGCCGACATGGATCTAAAGATCCAATTCCAGTCCAAAATAGTGGTAGGGAAGCTGATACGGATGCAATTGACGAAAAGGGAGATGATCAAAACTTGTCAGATCAAAGTTCTTTAAGACCGTGTGATGCAGATAATTGTGATAGTAGTTTTGGAAACAATACCTCCCATCTGGAGGATAACTGGGGACCAGAAAGCTTGCGGTTGTCTAGCCATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCTATCTCATCAAACCATGTGAAATTGGTTCTTTCACTGGACTCTGAACCTCCCATGTGCCCAGAGAGACGTTATTCTGAAGCAGTATTTCGAGCTTCAGATGTTGACAGATACGGCATTCTTGCAAGTGCAGAGAACCGGTTGGTTAGTGTGGACCTTGAGTCTGCAAATGCCGGAGCTGCCAAGTCCAAACTCAGAATGAAGCCTGAAAAGGTTATCAAGATAAAGTACATTCCCAAACAAAAGACAGCTACCTA 2093 0.4281 MPVAKPKASSTPDVMKAEDANDSIDTIIRQAFAKEPFLSFSRAGDSPAQWIQFLHALDQPEHPGWPLLSPLKVQLQKCDKCSQEFCSPINYRRHIRVHHRWKKLDKDSTKNRDLLGAYWDKLSIEEGKEVVSFKNVMLEDVEGSSILKALTTPIRKPGFSTLPQYYLKAGSALLDIIQARISRFISSQELFSILDDASEKTFLCGTAESMQKYIFDGEAGKIGLDPKNIVASTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRQAEILERKRQKKLRQKEQKAREQRHEDDAEIRDNNSSTGETVSSAVESSEACNNGAHNTDTFPDHILSSVAPFPNINGGVNGECQSSYGCEFTDLSTDHNIERRTAQGHNRQRMAATRWQVLPKSQWAAPNGFHTIQNQKLGVTQKQGTHRDQRAAPIVNGNKVWTRKPKPETDGVILKARPQNEPEQVKSHEVLIGSISVTLGNCSQSEGEGNLGASSQEDCTVDNLAKLNGVQEKPIQHDSNQSGNNRLIVKLWRPVSRHGSKDPIPVQNSGREADTDAIDEKGDDQNLSDQSSLRPCDADNCDSSFGNNTSHLEDNWGPESLRLSSHAAKAFLAQRWKEAISSNHVKLVLSLDSEPPMCPERRYSEAVFRASDVDRYGILASAENRLVSVDLESANAGAAKSKLRMKPEKVIKIKYIPKQKTAT 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01167 697 MobiDBLite consensus disorder prediction 547 561 - -
Bva04g01167 697 MobiDBLite consensus disorder prediction 278 330 - -
Bva04g01167 697 Coils Coil 265 292 - -
Bva04g01167 697 MobiDBLite consensus disorder prediction 532 574 - -
Bva04g01167 697 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Bva04g01167 697 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 696 - -
Bva04g01167 697 MobiDBLite consensus disorder prediction 305 330 - -
Bva04g01167 697 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Bva04g01167 697 MobiDBLite consensus disorder prediction 278 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01167 Bva-Chr4 7901928 7914342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01167 18 694 C2H2 Transcription Factor Family AT4G25610 43.149 2.05e-151 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva04g01167 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01167 - - gmx:100799153 817.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01167 04 7901928 7914342 Bva04g01167 04 7901928 7914342 ECH