Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01165 atgagTGTGACAAAAAGAAACTCCTATATGAATTCCTCACTTCCTCTCCAAACTGTTCTGGTGCAGACGAACGACGCAGCAAGAGGAATGGCTCCTAAACCGCCAAGTACCGGTTTGTTTGTGGGATTGAACAAGGGTCATATTGTGACCAAGAAGGAATTGCCTCCACGCCCCTCAGATCGCAAAGGGAAAACCAGTAAGCGGGTACACTTTGTGAGGAACTTGATCCGTGAAGTTGCTGGTTTTGCTCCATATGAAAAGAGAATCACCGAGCTTTTGAAGGTGGGTAAAGACAAGAGGGCACTTAAAGTTGCCAAGAGAAAGTTGGGCACTCACAAGAGAgctaagaagaagagagaggagaTGTCCAGCGTGCTCAGAAAAATGAGGGCTGGTGGAGCTGaccacaaaaagaaatg 419 0.4272 MSVTKRNSYMNSSLPLQTVLVQTNDAARGMAPKPPSTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGADHKKK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01165 139 PANTHER 60S RIBOSOMAL PROTEIN L36 18 139 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva04g01165 139 Pfam Ribosomal protein L36e 37 130 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva04g01165 139 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 18 139 - -
Bva04g01165 139 MobiDBLite consensus disorder prediction 108 139 - -
Bva04g01165 139 ProSitePatterns Ribosomal protein L36e signature. 84 94 IPR000509 GO:0003735|GO:0005840|GO:0006412
Bva04g01165 139 Gene3D 60S ribosomal protein L36 29 137 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01165 Bva-Chr4 7880890 7882606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01165 36 134 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 86.869 3.34e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01165 K02920 - gmx:100795507 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva03g01380 03 13215307 13218380 Bva04g01165 04 7880890 7882606 ECH
Bva04g01165 04 7880890 7882606 Bva04g01165 04 7880890 7882606 ECH